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22 changes: 22 additions & 0 deletions
22
src/npc_lims/scripts/generate_session_video_data_assets.py
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Original file line number | Diff line number | Diff line change |
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import npc_lims.metadata.codeocean as codeocean | ||
import npc_lims.status as status | ||
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def generate_helper(session_info: status.SessionInfo, model_name: str) -> None: | ||
if not getattr(session_info, model_name): | ||
try: | ||
codeocean.create_session_data_asset(session_info.id, model_name) | ||
except UnboundLocalError: | ||
pass | ||
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def main() -> None: | ||
for session_info in status.get_session_info(): | ||
if not session_info.is_uploaded: | ||
continue | ||
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generate_helper(session_info, 'dlc_eye') | ||
generate_helper(session_info, 'dlc_face') | ||
generate_helper(session_info, 'dlc_side') | ||
generate_helper(session_info, 'facemap') | ||
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if __name__ == "__main__": | ||
main() |
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,20 +1,26 @@ | ||
import npc_lims.metadata.codeocean as codeocean | ||
import npc_lims.status as status | ||
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def run_helper(session_info: status.SessionInfo, model_name: str, num_jobs: int) -> int: | ||
if not getattr(session_info, model_name): | ||
codeocean.run_capsule(session_info.id, model_name) | ||
num_jobs += 1 | ||
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return num_jobs | ||
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def main() -> None: | ||
num_jobs = 0 | ||
for session_info in status.get_session_info(): | ||
if not session_info.is_uploaded: | ||
continue | ||
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num_jobs = run_helper(session_info, 'dlc_eye', num_jobs) | ||
num_jobs = run_helper(session_info, 'dlc_side', num_jobs) | ||
num_jobs = run_helper(session_info, 'dlc_face', num_jobs) | ||
num_jobs = run_helper(session_info, 'facemap', num_jobs) | ||
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""" | ||
codeocean.run_capsule(session_info.id, "dlc_eye") | ||
codeocean.run_capsule(session_info.id, "dlc_front") | ||
codeocean.run_capsule(session_info.id, "dlc_side") | ||
codeocean.run_capsule(session_info.id, "facemap") | ||
""" | ||
codeocean.run_capsule(session_info.id, "video_pipeline") | ||
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if num_jobs == 12: | ||
break | ||
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if __name__ == "__main__": | ||
main() |
23 changes: 23 additions & 0 deletions
23
src/npc_lims/scripts/update_session_video_data_asset_permissions.py
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import npc_lims.metadata.codeocean as codeocean | ||
import npc_lims.status as status | ||
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def update_helper(session_info: status.SessionInfo, model_name: str) -> None: | ||
if getattr(session_info, model_name): | ||
try: | ||
model_session_data = codeocean.get_model_data_asset(session_info.id, model_name) | ||
codeocean.update_permissions_for_data_asset(model_session_data) | ||
except (ValueError, FileNotFoundError): | ||
pass | ||
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def main() -> None: | ||
for session_info in status.get_session_info(): | ||
if not session_info.is_uploaded: | ||
continue | ||
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update_helper(session_info, 'dlc_eye') | ||
update_helper(session_info, 'dlc_side') | ||
update_helper(session_info, 'dlc_face') | ||
update_helper(session_info, 'facemap') | ||
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if __name__ == '__main__': | ||
main() |
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