Add cupy support + CI #30
Workflow file for this run
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name: AWS GPU | |
on: | |
push: | |
branches: [main] | |
pull_request: | |
workflow_dispatch: | |
jobs: | |
build: | |
runs-on: "cirun-aws-gpu--${{ github.run_id }}" | |
defaults: | |
run: | |
shell: bash -el {0} | |
steps: | |
- uses: actions/checkout@v3 | |
with: | |
fetch-depth: 0 | |
- name: Nvidia SMI sanity check | |
run: nvidia-smi | |
- uses: mamba-org/setup-micromamba@v1 | |
with: | |
micromamba-version: "1.3.1-0" | |
environment-name: anndata-gpu-ci | |
create-args: >- | |
python=3.10 | |
cupy | |
init-shell: >- | |
bash | |
generate-run-shell: false | |
- name: Install AnnData | |
run: pip install .[dev,test,gpu] | |
- name: Mamba list | |
run: micromamba list | |
- name: Run test | |
run: pytest --only-gpu |