Skip to content
@qiime2

QIIME 2

Welcome to the QIIME 2 GitHub Organization! 👋

If you're a QIIME 2 user or developer, or are thinking about becoming one, refer to our Support Guidelines for details on how to learn or get help with QIIME 2.

If you're interested in contributing to repositories in the qiime2 GitHub organization, please start by reading our Contributing Guidelines.

This organization is primarily managed by the Caporaso Lab at Northern Arizona University, but has contributors from all over the world. If you have questions that aren't covered in the resources above, the best way to reach us is on the QIIME 2 Forum - it's where we hang out.

Pinned Loading

  1. qiime2 qiime2 Public

    Official repository for the QIIME 2 framework.

    Python 473 240

  2. distributions distributions Public

    Makefile 1 5

  3. q2cli q2cli Public

    Command line interface for QIIME 2

    Python 19 24

  4. docs docs Public

    Python 21 58

Repositories

Showing 10 of 73 repositories
  • library Public

    A website for sharing QIIME 2 Plugins

    qiime2/library’s past year of commit activity
    Svelte 0 BSD-3-Clause 1 3 0 Updated Oct 30, 2024
  • galaxy-tools Public

    Official QIIME 2 tools for Galaxy

    qiime2/galaxy-tools’s past year of commit activity
    Python 1 BSD-3-Clause 4 8 4 Updated Oct 29, 2024
  • qiime2/distributions’s past year of commit activity
    Makefile 1 BSD-3-Clause 5 2 0 Updated Oct 29, 2024
  • docs Public
    qiime2/docs’s past year of commit activity
    Python 21 BSD-3-Clause 58 32 (1 issue needs help) 0 Updated Oct 29, 2024
  • qiime2 Public

    Official repository for the QIIME 2 framework.

    qiime2/qiime2’s past year of commit activity
    Python 473 BSD-3-Clause 240 64 (5 issues need help) 7 Updated Oct 25, 2024
  • q2cli Public

    Command line interface for QIIME 2

    qiime2/q2cli’s past year of commit activity
    Python 19 BSD-3-Clause 24 12 (1 issue needs help) 0 Updated Oct 25, 2024
  • data302 Public
    qiime2/data302’s past year of commit activity
    Python 0 BSD-3-Clause 10 1 0 Updated Oct 25, 2024
  • library-plugins Public

    Stores a list of the repos that are included in the QIIME 2 library

    qiime2/library-plugins’s past year of commit activity
    0 BSD-3-Clause 2 0 0 Updated Oct 24, 2024
  • q2view Public

    A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations

    qiime2/q2view’s past year of commit activity
    TypeScript 0 BSD-3-Clause 1 1 1 Updated Oct 24, 2024
  • qiime2/q2view-gallery’s past year of commit activity
    HTML 0 BSD-3-Clause 3 0 0 Updated Oct 24, 2024