Update infra and actions (2023-10) (#62)

* migrate to setuptools_scm

* swap setup/reqs/etc for pyproject

* bump supported Python 3.{10,11,12}

* re-lint repo

* add file extension to LIC

* remove MAN

* remove tools/

* update GHA

* update docs

* min -> MIN in 310

* update codecov

* update README

.github/release.yml

@@ -0,0 +1,19 @@
+changelog:
+ exclude:
+ labels:
+ - ignore-for-release
+ authors:
+ - dependabot
+ categories:
+ - title: Bug Fixes
+ labels:
+ - bug
+ - title: Enhancements
+ labels:
+ - enhancement
+ - title: Maintenance
+ labels:
+ - maintenance
+ - title: Other Changes
+ labels:
+ - "*"

.github/workflows/build_docs.yml

@@ -1,6 +1,5 @@
 
  name: Build Docs
-
  on:
  push:
  # Sequence of patterns matched against refs/tags
@@ -21,25 +20,30 @@
  strategy:
  matrix:
  os: ['ubuntu-latest']
- environment-file: [ci/311.yaml]
+ environment-file: [ci/312.yaml]
  experimental: [false]
  defaults:
  run:
  shell: bash -l {0}
- 
+
  steps:
  - name: Checkout repo
- uses: actions/checkout@v3
-
+ uses: actions/checkout@v4
+ with:
+ fetch-depth: 0 # Fetch all history for all branches and tags.
+
  - name: Setup micromamba
- uses: mamba-org/provision-with-micromamba@main
+ uses: mamba-org/setup-micromamba@v1
  with:
  environment-file: ${{ matrix.environment-file }}
  micromamba-version: 'latest'
-
+
+ - name: Install
+ run: pip install -e . --no-deps --force-reinstall
+
  - name: Make Docs
  run: cd docs; make html
- 
+
  - name: Commit Docs
  run: |
  git clone https://github.com/ammaraskar/sphinx-action-test.git --branch gh-pages --single-branch gh-pages
@@ -51,8 +55,8 @@
  git commit -m "Update documentation" -a || true
  # The above command will fail if no changes were present,
  # so we ignore the return code.
- 
- - name: push to gh-pages
+
+ - name: Push to gh-pages
  uses: ad-m/github-push-action@master
  with:
  branch: gh-pages

.github/workflows/release_and_publish.yml

@@ -0,0 +1,52 @@
+ #--------------------------------------------------
+ name: Release & Publish
+
+ on:
+ push:
+ # Sequence of patterns matched against refs/tags
+ tags:
+ - "v*" # Push events to matching v*, i.e. v1.0, v20.15.10
+ workflow_dispatch:
+ inputs:
+ version:
+ description: Manual Release
+ default: test
+ required: false
+
+ jobs:
+ build:
+ name: Create release & publish to PyPI
+ runs-on: ubuntu-latest
+
+ steps:
+ - name: Checkout repo
+ uses: actions/checkout@v4
+ with:
+ fetch-depth: 0 # Fetch all history for all branches and tags.
+
+ - name: Set up python
+ uses: actions/setup-python@v4
+ with:
+ python-version: "3.x"
+
+ - name: Install Dependencies
+ run: |
+ python -m pip install --upgrade pip build twine
+ python -m build
+ twine check --strict dist/*
+
+ - name: Create Release Notes
+ uses: actions/github-script@v6
+ with:
+ github-token: ${{secrets.GITHUB_TOKEN}}
+ script: |
+ await github.request(`POST /repos/${{ github.repository }}/releases`, {
+ tag_name: "${{ github.ref }}",
+ generate_release_notes: true
+ });
+
+ - name: Publish distribution 📦 to PyPI
+ uses: pypa/gh-action-pypi-publish@release/v1
+ with:
+ user: __token__
+ password: ${{ secrets.PYPI_PASSWORD }}

.github/workflows/testing.yml

@@ -18,61 +18,53 @@
  required: false
 
  jobs:
- linting:
- runs-on: ubuntu-latest
- steps:
- - uses: actions/checkout@v3
- - uses: actions/setup-python@v4
- - uses: pre-commit/action@v3.0.0
-
  testing:
- needs: linting
- env:
- RUN_TEST: pytest inequality -v -r a -n auto --cov inequality --doctest-modules --cov-config .coveragerc --cov-report xml --color yes --cov-append --cov-report term-missing
  name: ${{ matrix.os }}, ${{ matrix.environment-file }}
  runs-on: ${{ matrix.os }}
  timeout-minutes: 30
  strategy:
  matrix:
  os: [ubuntu-latest]
  environment-file:
- - ci/38.yaml
- - ci/39.yaml
- - ci/310.yaml
+ - ci/310-MIN.yaml
  - ci/311.yaml
- - ci/311-DEV.yaml
+ - ci/312.yaml
+ - ci/312-DEV.yaml
  include:
- - environment-file: ci/311.yaml
+ - environment-file: ci/312.yaml
  os: macos-latest
- - environment-file: ci/311.yaml
+ - environment-file: ci/312.yaml
  os: windows-latest
  fail-fast: false
+
+ defaults:
+ run:
+ shell: bash -l {0}
 
  steps:
  - name: checkout repo
- uses: actions/checkout@v3
+ uses: actions/checkout@v4
+ with:
+ fetch-depth: 0 # Fetch all history for all branches and tags.
 
  - name: setup micromamba
- uses: mamba-org/provision-with-micromamba@main
+ uses: mamba-org/setup-micromamba@v1
  with:
  environment-file: ${{ matrix.environment-file }}
  micromamba-version: 'latest'
-
- - name: install bleeding edge libpysal (Ubuntu / Python 3.11)
- shell: bash -l {0}
+
+ - name: run tests
  run: |
- pip install git+https://github.com/pysal/libpysal.git@main
- if: matrix.os == 'ubuntu-latest' && contains(matrix.environment-file, 'DEV')
-
- - name: run tests - bash
- shell: bash -l {0}
- run: ${{ env.RUN_TEST }}
- if: matrix.os != 'windows-latest'
-
- - name: run tests - powershell
- shell: powershell
- run: ${{ env.RUN_TEST }}
- if: matrix.os == 'windows-latest'
+ pytest inequality \
+ -v \
+ -r a \
+ -n auto \
+ --color yes \
+ --cov inequality \
+ --cov-report xml \
+ --cov-report term-missing \
+ --cov-append \
+ --doctest-modules
  
  - name: codecov
  uses: codecov/codecov-action@v3

.pre-commit-config.yaml

@@ -1,16 +1,15 @@
+files: "inequality\/"
 repos:
-- repo: https://github.com/pycqa/isort
- rev: 5.12.0
- hooks:
- - id: isort
- language_version: python3
-- repo: https://github.com/pycqa/flake8
- rev: 6.1.0
- hooks:
- - id: flake8
- language_version: python3
-- repo: https://github.com/psf/black
- rev: 23.10.0
- hooks:
- - id: black
- language_version: python3
+ - repo: https://github.com/psf/black
+ rev: "23.10.0"
+ hooks:
+ - id: black
+ language_version: python3
+ - repo: https://github.com/astral-sh/ruff-pre-commit
+ rev: "v0.1.2"
+ hooks:
+ - id: ruff
+
+ci:
+ autofix_prs: false
+ autoupdate_schedule: quarterly