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zippypretext
Publicagp-tpf-utils
Publicreadmapping
Publicascc
PublicMicroFinder
Publicsingularity-hpc
Publicgenomenote
PublicThis Nextflow DSL2 pipeline takes aligned HiC reads, creates contact maps and a table of statistics.gda
PublicPretext-curation-tools
Publictreeval
PublicPipelines for the production of Treeval datacurationpretext
Publictolqc
Public.github
Publictol-submissions
Publicgenomeassembly
Publictolid-api
Publicpipelines-website
Publicsummary-stats-analyses
PublicPretextView
Publicsoftware-tracker
Publicinsdcdownload
Publicgenealignment
Publicensemblrepeatdownload
Publictol-qc
Publictol-track
Publicvariantcalling
PublicThis Nextflow DSL2 pipeline calls variants on long read alignment. It is run after sanger-tol/readmapping in the Sanger ToL production suite but with options to run on unaligned reads.