Move terms under [peripheral nervous system neuron]

[AvolaAmg]

Fixes #2656

[AvolaAmg]

#gogoeditdiff

[github-actions]

Here's a diff of how these changes impact the classified ontology (on -simple file):

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-simple.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2024-10-21/cl-simple.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-simple-master.owl/cl-simple.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-simple.owl
• Version IRI: http://purl.obolibrary.org/obo/cl/releases/2024-10-21/cl-simple.owl
• Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-simple-pr.owl/cl-simple.owl

Ontology imports

Ontology annotations

Rohon-Beard neuron http://purl.obolibrary.org/obo/CL_0000247

Removed

• Rohon-Beard neuron SubClassOf somatosensory neuron

• Rohon-Beard neuron SubClassOf neuronal receptor cell

cardiac neuron http://purl.obolibrary.org/obo/CL_0010022

Removed

• cardiac neuron SubClassOf neuron

Added

• cardiac neuron SubClassOf peripheral nervous system neuron

photoreceptor cell http://purl.obolibrary.org/obo/CL_0000210

Removed

• photoreceptor cell SubClassOf sensory neuron

Added

• photoreceptor cell SubClassOf peripheral sensory neuron

polymodal neuron http://purl.obolibrary.org/obo/CL_0000102

Removed

• polymodal neuron SubClassOf neuron

Added

• polymodal neuron SubClassOf peripheral nervous system neuron

pseudounipolar neuron http://purl.obolibrary.org/obo/CL_0000105

Removed

• pseudounipolar neuron SubClassOf neuron

Added

• pseudounipolar neuron SubClassOf peripheral nervous system neuron

retinal bipolar neuron http://purl.obolibrary.org/obo/CL_0000748

Removed

• retinal bipolar neuron SubClassOf bipolar neuron

sensory neuron of dorsal root ganglion http://purl.obolibrary.org/obo/CL_1001451

Added

• sensory neuron of dorsal root ganglion SubClassOf peripheral sensory neuron

sensory processing neuron http://purl.obolibrary.org/obo/CL_0000379

Removed

• sensory processing neuron SubClassOf neuron

Added

• sensory processing neuron SubClassOf peripheral nervous system neuron

somatosensory neuron http://purl.obolibrary.org/obo/CL_4023168

Removed

• somatosensory neuron SubClassOf neuron

Added

• somatosensory neuron SubClassOf peripheral nervous system neuron

spiral ganglion neuron http://purl.obolibrary.org/obo/CL_0011113

Removed

• spiral ganglion neuron SubClassOf neuron

Added

• spiral ganglion neuron SubClassOf peripheral nervous system neuron

trigeminal sensory neuron http://purl.obolibrary.org/obo/CL_4023170

Removed

• trigeminal sensory neuron SubClassOf somatosensory neuron

unipolar neuron http://purl.obolibrary.org/obo/CL_0000106

Removed

• unipolar neuron SubClassOf neuron

Added

• unipolar neuron SubClassOf peripheral nervous system neuron

[github-actions]

Here's a diff of your edit file (unreasoned)

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/master/src/ontology/cl-edit.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
• Version IRI: None
• Loaded from: file:/__w/cell-ontology/cell-ontology/branch/src/ontology/cl-edit.owl

Ontology imports

Ontology annotations

Rohon-Beard neuron http://purl.obolibrary.org/obo/CL_0000247

Removed

• Rohon-Beard neuron SubClassOf somatosensory neuron

cardiac neuron http://purl.obolibrary.org/obo/CL_0010022

Removed

• cardiac neuron EquivalentTo neuron and (has soma location some heart)

Added

• cardiac neuron EquivalentTo peripheral nervous system neuron and (has soma location some heart)

photoreceptor cell http://purl.obolibrary.org/obo/CL_0000210

Removed

• photoreceptor cell EquivalentTo neuron and (capable of some detection of light stimulus involved in visual perception)

Added

• photoreceptor cell EquivalentTo peripheral nervous system neuron and (capable of some detection of light stimulus involved in visual perception)

polymodal neuron http://purl.obolibrary.org/obo/CL_0000102

Removed

• polymodal neuron SubClassOf neuron

Added

• polymodal neuron SubClassOf peripheral nervous system neuron

pseudounipolar neuron http://purl.obolibrary.org/obo/CL_0000105

Removed

• pseudounipolar neuron SubClassOf neuron

Added

• pseudounipolar neuron SubClassOf peripheral nervous system neuron

retinal bipolar neuron http://purl.obolibrary.org/obo/CL_0000748

Removed

• retinal bipolar neuron EquivalentTo bipolar neuron and (has soma location some inner nuclear layer of retina)

Added

• retinal bipolar neuron EquivalentTo neuron and (has soma location some inner nuclear layer of retina)

sensory processing neuron http://purl.obolibrary.org/obo/CL_0000379

Removed

• sensory processing neuron SubClassOf neuron

Added

• sensory processing neuron SubClassOf neuron and (has soma location some peripheral nervous system)

somatosensory neuron http://purl.obolibrary.org/obo/CL_4023168

Removed

• somatosensory neuron EquivalentTo neuron and (part of some somatosensory system)

Added

• somatosensory neuron EquivalentTo neuron and (part of some somatosensory system) and (has soma location some peripheral nervous system)

spiral ganglion neuron http://purl.obolibrary.org/obo/CL_0011113

Removed

• spiral ganglion neuron EquivalentTo neuron and (has soma location some cochlear ganglion)

Added

• spiral ganglion neuron EquivalentTo peripheral nervous system neuron and (has soma location some cochlear ganglion)

unipolar neuron http://purl.obolibrary.org/obo/CL_0000106

Removed

• unipolar neuron SubClassOf neuron

Added

• unipolar neuron SubClassOf peripheral nervous system neuron

[Caroline-99]

#gogoeditdiff

[AvolaAmg]

@Caroline-99 I have addressed your comments, feel free to re-review.

[Caroline-99]

#gogoeditdiff

[Caroline-99]

Thank you for doing all the changes. Everything looks good other than the photoreceptor cell, I will approve it once you change the classification.