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fix: minor fixes and additional guards to prevent tags with quality u… #2080

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fix: minor fixes and additional guards to prevent tags with quality u…

fix: minor fixes and additional guards to prevent tags with quality u… #2080

Triggered via push July 24, 2023 16:09
@dbolotindbolotin
pushed 48aa407
tag-sequence-quality-fix
Status Failure
Total duration 17m 15s
Artifacts 2

build.yaml

on: push
init
14s
init
run  /  Init
4s
run / Init
run  /  :build
1m 5s
run / :build
run  /  archive
6m 24s
run / archive
run  /  :setup tests matrix
9s
run / :setup tests matrix
run  /  docker
7m 17s
run / docker
run  /  library
2m 5s
run / library
run  /  :test (unit)
13m 44s
run / :test (unit)
run  /  notify archive build
9s
run / notify archive build
run  /  update the latest build link on the CDN
10s
run / update the latest build link on the CDN
Matrix: run / :test (reg)
Matrix: run / :test (int)
run  /  notify docker build
13s
run / notify docker build
run  /  can release
0s
run / can release
run  /  notify library build
12s
run / notify library build
run  /  notify unit test
11s
run / notify unit test
run  /  :test (reg) create pr
0s
run / :test (reg) create pr
run  /  notify regression test
9s
run / notify regression test
run  /  notify integration test
11s
run / notify integration test
run  /  confirm release
0s
run / confirm release
run  /  notify regression tests changes
0s
run / notify regression tests changes
run  /  fail workflow on regression tests changes
0s
run / fail workflow on regression tests changes
run  /  notify review required
0s
run / notify review required
run  /  github release
0s
run / github release
run  /  s3 archive release
0s
run / s3 archive release
run  /  library release
0s
run / library release
run  /  notify release
0s
run / notify release
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25 errors and 2 notices
run / :test (int) (case022-sample-barcode)
Process completed with exit code 1.
run / :test (int) (case012)
Process completed with exit code 1.
run / :test (reg) (baseSingleCell)
Process completed with exit code 1.
run / :test (int) (case-reset_whitelist)
Process completed with exit code 1.
run / :test (int) (case-regression_vdjca_4)
Process completed with exit code 1.
run / :test (int) (case-regression_vdjca_1)
Process completed with exit code 1.
run / :test (reg) (baseBuldTrees)
Process completed with exit code 1.
run / :test (int) (case-search_for_alleles_on_broken_library)
Process completed with exit code 1.
run / :test (int) (case020-umi-consensus)
Process completed with exit code 1.
run / :test (int) (case026-sample-sheet-as-input)
Process completed with exit code 1.
run / :test (int) (case-single_cell_reproducible_hash)
Process completed with exit code 1.
run / :test (int) (case-single_cell_vdjcacontigs_reproducible_hash)
Process completed with exit code 1.
run / :test (int) (case-qc)
Process completed with exit code 1.
run / :test (int) (case-regression_vdjca_2)
Process completed with exit code 1.
run / :test (int) (case024-sample-table-mixin)
Process completed with exit code 1.
run / :test (int) (case-regression_vdjca_0)
Process completed with exit code 1.
run / :test (int) (case011)
Process completed with exit code 1.
run / :test (int) (case025-sample-from-file-name)
Process completed with exit code 1.
run / :test (int) (case021_multiple_cell_barcodes_aliases)
Process completed with exit code 1.
run / :test (int) (case-base_single_cell)
Process completed with exit code 1.
run / :test (int) (case019_multiple_cell_barcodes)
Process completed with exit code 1.
run / :test (int) (case-regression_vdjca_3)
Process completed with exit code 1.
run / :test (int) (case-buld_trees_on_data_with_a_hole)
Process completed with exit code 1.
run / :test (int) (case-build_trees_reproducible_hash)
Process completed with exit code 1.
run / :test (int) (case-base_build_trees)
Process completed with exit code 1.
init
Current commit seems to have no tag. Version number will be generated. command "git 'describe' '--tags' '--abbrev=0' '--exact-match' 'HEAD'" failed with code '128': fatal: no tag exactly matches '48aa407b9db99f56e81e5e47976f281b74512e46'
run / docker
Pushed Docker tags: ghcr.io/milaboratory/mixcr/mixcr:4.4.1-8-tag-sequence-quality-fix ghcr.io/milaboratory/mixcr/mixcr:latest-tag-sequence-quality-fix

Artifacts

Produced during runtime
Name Size
context Expired
492 Bytes
mixcr Expired
98.2 MB