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  • Institute of Pathology, Technical University Munich
  • X @johwirth

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jwrth/README.md

About me

Interested in interdisciplinary research between biology 🧬, chemistry 🥼 and bioinformatics 💻. Currently working in the field of spatial transcriptomics 🗺️.

I am seeking for collaborators and groups to explore innovative approaches for utilizing multi-omics data with direct implications for solving clinical problems💊.

Popular repositories Loading

  1. xDBiT_toolbox xDBiT_toolbox Public

    Analysis pipeline for multiplexed Deterministic Barcoding in Tissue (xDBiT)

    Jupyter Notebook 6 2

  2. scanpy scanpy Public

    Forked from scverse/scanpy

    Single-Cell Analysis in Python. Scales to >1M cells.

    Python

  3. cellpose cellpose Public

    Forked from MouseLand/cellpose

    a generalist algorithm for cellular segmentation

    Jupyter Notebook

  4. jwrth jwrth Public

    Config files for my GitHub profile.

  5. mofax mofax Public

    Forked from bioFAM/mofax

    Work with trained factor models in Python

    Jupyter Notebook

  6. spatialdata-io spatialdata-io Public

    Forked from scverse/spatialdata-io

    Python