galaxy-tools

Some DeVL/GVL tools for Galaxy.

Standards

Tools should comply with the IUC standards

Specifically:

• Indentation is correct (4 spaces)
• Tool version/build ok
• <command/>
  • Text parameters, input and output files 'single quoted'
  • Use of <![CDATA[ ... ]]> tags
  • Parameters of type text or having optional="true" attribute are checked with if str($param) before being used
• Data parameters have a format attribute containing datatypes recognised by Galaxy
• Tests
  • Parameters are reasonably covered
  • Test files are appropriate
• Help
  • Valid restructuredText and uses <![CDATA[ ... ]]> tags