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@github-actions github-actions released this 07 Dec 07:51
· 344 commits to master since this release
v0.8.0
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SciMLTutorials v0.8.0

Diff since v0.7.0

Closed issues:

  • SparsityDetection bug in 02_advanced_ODE_solving notebook (#148)
  • How can I run the interactive notebook (#157)
  • Have a script to automatically detect changes to a tutorial and weave those tutorials (#161)
  • Bug in 08 Kolmogorov.jl (#168)
  • weaving produces errors in 08-spiking_neural_systems.jmd (#325)

Merged pull requests:

  • CompatHelper: bump compat for "ModelingToolkit" to "3.0" (#155) (@github-actions[bot])
  • CompatHelper: bump compat for "SparsityDetection" to "0.3" (#156) (@github-actions[bot])
  • CompatHelper: bump compat for "Optim" to "0.21" (#158) (@github-actions[bot])
  • CompatHelper: bump compat for "Weave" to "0.10" (#159) (@github-actions[bot])
  • [WIP] Add tutorial for Kolmogorov Equations from NeuralNetDiffEq (#160) (@ashutosh-b-b)
  • CompatHelper: bump compat for "MCMCChains" to "4.0" (#162) (@github-actions[bot])
  • Rebuild tutorials automatically (#163) (@christopher-dG)
  • CompatHelper: add new compat entry for "Flux" at version "0.10" (#164) (@github-actions[bot])
  • CompatHelper: add new compat entry for "NeuralNetDiffEq" at version "1.5" (#165) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DiffEqNoiseProcess" at version "4.2" (#166) (@github-actions[bot])
  • CompatHelper: add new compat entry for "StochasticDiffEq" at version "6.23" (#167) (@github-actions[bot])
  • Clean up Kolmogorov equations (#169) (@ChrisRackauckas)
  • Add a reaction to trigger comments + bugfixes (#170) (@christopher-dG)
  • Fix folder/file parsing for real (#171) (@christopher-dG)
  • Rebuild tutorials (#172) (@github-actions[bot])
  • Allow specifying rebuild branch (#176) (@christopher-dG)
  • CompatHelper: bump compat for "DecFP" to "1.0" (#177) (@github-actions[bot])
  • Split project tomls (#178) (@ChrisRackauckas)
  • [WIP]Debug errors in Kolmogorov Equations model (#179) (@ashutosh-b-b)
  • CompatHelper: add new compat entry for "NeuralNetDiffEq" at version "1.5" (#180) (@github-actions[bot])
  • CompatHelper: add new compat entry for "CUDA" at version "1.0" (#181) (@github-actions[bot])
  • Use new RebuildAction (#182) (@christopher-dG)
  • Rebuild content (#183) (@github-actions[bot])
  • CompatHelper: add new compat entry for "BenchmarkTools" at version "0.5" for package advanced (#184) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DiffEqOperators" at version "4.10" for package advanced (#185) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DifferentialEquations" at version "6.14" for package advanced (#186) (@github-actions[bot])
  • CompatHelper: add new compat entry for "SparsityDetection" at version "0.3" for package advanced (#187) (@github-actions[bot])
  • CompatHelper: add new compat entry for "NLsolve" at version "4.4" for package advanced (#188) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Sundials" at version "4.2" for package advanced (#189) (@github-actions[bot])
  • CompatHelper: add new compat entry for "AlgebraicMultigrid" at version "0.3" for package advanced (#190) (@github-actions[bot])
  • CompatHelper: add new compat entry for "OrdinaryDiffEq" at version "5.41" for package advanced (#191) (@github-actions[bot])
  • CompatHelper: add new compat entry for "ModelingToolkit" at version "3.10" for package advanced (#192) (@github-actions[bot])
  • CompatHelper: add new compat entry for "CuArrays" at version "2.2" for package advanced (#193) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Plots" at version "1.4" for package advanced (#194) (@github-actions[bot])
  • CompatHelper: add new compat entry for "CUDAnative" at version "3.1" for package advanced (#195) (@github-actions[bot])
  • CompatHelper: add new compat entry for "SparseDiffTools" at version "1.9" for package advanced (#196) (@github-actions[bot])
  • Rebuild content (#197) (@github-actions[bot])
  • Catch PDF generation errors (#198) (@christopher-dG)
  • CompatHelper: add new compat entry for "StaticArrays" at version "0.12" for package introduction (#199) (@github-actions[bot])
  • CompatHelper: add new compat entry for "ParameterizedFunctions" at version "5.3" for package introduction (#200) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Plots" at version "1.4" for package introduction (#201) (@github-actions[bot])
  • CompatHelper: add new compat entry for "BenchmarkTools" at version "0.5" for package introduction (#202) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DifferentialEquations" at version "6.14" for package introduction (#203) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Sundials" at version "4.2" for package introduction (#204) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DiffEqParamEstim" at version "1.15" for package model_inference (#205) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Optim" at version "0.21" for package model_inference (#206) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Distributions" at version "0.23" for package model_inference (#207) (@github-actions[bot])
  • CompatHelper: add new compat entry for "CmdStan" at version "6.0" for package model_inference (#208) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DiffEqBayes" at version "2.15" for package model_inference (#209) (@github-actions[bot])
  • CompatHelper: add new compat entry for "OrdinaryDiffEq" at version "5.41" for package model_inference (#210) (@github-actions[bot])
  • CompatHelper: add new compat entry for "TransformVariables" at version "0.3" for package model_inference (#211) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DynamicHMC" at version "2.1" for package model_inference (#212) (@github-actions[bot])
  • CompatHelper: add new compat entry for "BenchmarkTools" at version "0.5" for package model_inference (#213) (@github-actions[bot])
  • CompatHelper: add new compat entry for "StatsPlots" at version "0.14" for package model_inference (#214) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Plots" at version "1.4" for package model_inference (#215) (@github-actions[bot])
  • CompatHelper: add new compat entry for "RecursiveArrayTools" at version "2.5" for package model_inference (#216) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DifferentialEquations" at version "6.14" for package model_inference (#217) (@github-actions[bot])
  • CompatHelper: add new compat entry for "ModelingToolkit" at version "3.10" for package models (#218) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Optim" at version "0.21" for package models (#219) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Distributions" at version "0.23" for package models (#220) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Latexify" at version "0.13" for package models (#221) (@github-actions[bot])
  • CompatHelper: add new compat entry for "NeuralNetDiffEq" at version "1.6" for package models (#222) (@github-actions[bot])
  • CompatHelper: add new compat entry for "StochasticDiffEq" at version "6.23" for package models (#223) (@github-actions[bot])
  • CompatHelper: add new compat entry for "OrdinaryDiffEq" at version "5.41" for package models (#224) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DiffEqBiological" at version "4.3" for package models (#225) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DiffEqDevTools" at version "2.22" for package models (#226) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DiffEqPhysics" at version "3.5" for package models (#227) (@github-actions[bot])
  • CompatHelper: add new compat entry for "ForwardDiff" at version "0.10" for package models (#228) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Plots" at version "1.4" for package models (#229) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Flux" at version "0.10" for package models (#230) (@github-actions[bot])
  • CompatHelper: add new compat entry for "NLsolve" at version "4.4" for package models (#231) (@github-actions[bot])
  • CompatHelper: add new compat entry for "RecursiveArrayTools" at version "2.5" for package models (#232) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DifferentialEquations" at version "6.14" for package models (#233) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Plots" at version "1.4" for package ode_extras (#234) (@github-actions[bot])
  • CompatHelper: add new compat entry for "ModelingToolkit" at version "3.10" for package ode_extras (#235) (@github-actions[bot])
  • CompatHelper: add new compat entry for "NLsolve" at version "4.4" for package ode_extras (#236) (@github-actions[bot])
  • CompatHelper: add new compat entry for "OrdinaryDiffEq" at version "5.41" for package ode_extras (#237) (@github-actions[bot])
  • CompatHelper: bump compat for "Optim" to "0.22" for package model_inference (#238) (@github-actions[bot])
  • CompatHelper: bump compat for "Optim" to "0.22" for package models (#239) (@github-actions[bot])
  • Move kolmogorov tutorial to advanced and add dependencies. (#240) (@ashutosh-b-b)
  • Removed Kolmogorov from tutorials/models (#241) (@ashutosh-b-b)
  • CompatHelper: add new compat entry for "Flux" at version "0.10" for package advanced (#242) (@github-actions[bot])
  • CompatHelper: add new compat entry for "NeuralNetDiffEq" at version "1.6" for package advanced (#243) (@github-actions[bot])
  • Rebuild content (#244) (@github-actions[bot])
  • CompatHelper: add new compat entry for "StochasticDiffEq" at version "6.23" for package advanced (#245) (@github-actions[bot])
  • Rebuild content (#247) (@github-actions[bot])
  • [WIP] Improve Kolmogorov convergence (#248) (@ashutosh-b-b)
  • Rebuild content (#250) (@github-actions[bot])
  • Rebuild ode_extras/01-ModelingToolkit.jmd, ode_extras/02-feagin.jmd (#253) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Optim" at version "0.22" for package ode_extras (#256) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DiffEqDevTools" at version "2.22" for package ode_extras (#257) (@github-actions[bot])
  • CompatHelper: add new compat entry for "NLopt" at version "0.6" for package ode_extras (#258) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DifferentialEquations" at version "6.14" for package ode_extras (#259) (@github-actions[bot])
  • Rebuild exercises/02-workshop_solutions.jmd (#261) (@github-actions[bot])
  • CompatHelper: add new compat entry for "SparsityDetection" at version "0.3" for package exercises (#262) (@github-actions[bot])
  • Rebuild advanced/01-beeler_reuter.jmd, advanced/02-advanced_ODE_solving.jmd, advanced/03-kolmogorov_equations.jmd (#263) (@github-actions[bot])
  • Rebuild introduction/03-optimizing_diffeq_code.jmd (#266) (@github-actions[bot])
  • Rebuild advanced/03-kolmogorov_equations.jmd (#272) (@github-actions[bot])
  • CompatHelper: bump compat for "Flux" to "0.11" for package advanced (#273) (@github-actions[bot])
  • CompatHelper: bump compat for "Flux" to "0.11" for package exercises (#274) (@github-actions[bot])
  • CompatHelper: bump compat for "Flux" to "0.11" for package models (#275) (@github-actions[bot])
  • Finish renaming DiffEqTutorials -> SciMLTutorials (#276) (@christopher-dG)
  • [WIP] DiffEqUncertainty Tutorials (#278) (@agerlach)
  • Rebuild introduction/02-choosing_algs.jmd (#279) (@github-actions[bot])
  • Rebuild exercises/01-workshop_exercises.jmd (#280) (@github-actions[bot])
  • Rebuild exercises/02-workshop_solutions.jmd (#281) (@github-actions[bot])
  • Fix links to docs and devdocs (#282) (@felixcremer)
  • Rebuild introduction/01-ode_introduction.jmd (#283) (@github-actions[bot])
  • fix typos (#284) (@Moelf)
  • CompatHelper: add new compat entry for "NLopt" at version "0.6" for package DiffEqUncertainty (#285) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DifferentialEquations" at version "6.15" for package DiffEqUncertainty (#286) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DiffEqUncertainty" at version "1.5" for package DiffEqUncertainty (#287) (@github-actions[bot])
  • CompatHelper: add new compat entry for "BenchmarkTools" at version "0.5" for package DiffEqUncertainty (#288) (@github-actions[bot])
  • CompatHelper: add new compat entry for "OrdinaryDiffEq" at version "5.42" for package DiffEqUncertainty (#289) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Distributions" at version "0.23" for package DiffEqUncertainty (#290) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DiffEqGPU" at version "1.5" for package DiffEqUncertainty (#291) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Plots" at version "1.5" for package DiffEqUncertainty (#292) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DiffEqSensitivity" at version "6.28" for package DiffEqUncertainty (#293) (@github-actions[bot])
  • Fixup broken links (#295) (@dangirsh)
  • Update old links to juliadiffeq.org to sciml.ai (#296) (@dangirsh)
  • Rebuild DiffEqUncertainty/01-expectation_introduction.jmd, DiffEqUncertainty/02-AD_and_optimization.jmd (#297) (@github-actions[bot])
  • DEU tutorial fix (#298) (@agerlach)
  • Rebuild DiffEqUncertainty/01-expectation_introduction.jmd, DiffEqUncertainty/02-AD_and_optimization.jmd (#299) (@github-actions[bot])
  • Rebuild DiffEqUncertainty/01-expectation_introduction.jmd, DiffEqUncertainty/02-AD_and_optimization.jmd (#300) (@github-actions[bot])
  • Rebuild introduction/01-ode_introduction.jmd (#302) (@github-actions[bot])
  • Rebuild advanced/02-advanced_ODE_solving.jmd (#303) (@github-actions[bot])
  • Rebuild models/05-kepler_problem.jmd (#305) (@github-actions[bot])
  • Rebuild introduction/03-optimizing_diffeq_code.jmd (#306) (@github-actions[bot])
  • CompatHelper: bump compat for "Latexify" to "0.14" for package models (#307) (@github-actions[bot])
  • Rebuild DiffEqUncertainty/01-expectation_introduction.jmd (#308) (@github-actions[bot])
  • Rebuild type_handling/03-unitful.jmd (#309) (@github-actions[bot])
  • Rebuild type_handling/02-uncertainties.jmd (#310) (@github-actions[bot])
  • Rebuild introduction/03-optimizing_diffeq_code.jmd (#311) (@github-actions[bot])
  • Added models/08-spiking_neural_systems.jmd (#312) (@danielmk)
  • Rebuild models/08-spiking_neural_systems.jmd (#313) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Plots" at version "1.6" (#314) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DSP" at version "0.6" (#315) (@github-actions[bot])
  • CompatHelper: bump compat for "Optim" to "1.0" for package exercises (#316) (@github-actions[bot])
  • CompatHelper: bump compat for "Optim" to "1.0" for package model_inference (#317) (@github-actions[bot])
  • CompatHelper: bump compat for "Optim" to "1.0" for package models (#318) (@github-actions[bot])
  • CompatHelper: bump compat for "Optim" to "1.0" for package ode_extras (#319) (@github-actions[bot])
  • Rebuild introduction/05-formatting_plots.jmd (#321) (@github-actions[bot])
  • added synapses in 08-spiking_neural_systems (#322) (@danielmk)
  • Replace DiffEqBiological and NeuralNetDiffEq with Catalyst and NeuralPDE (#326) (@devmotion)
  • Rebuild models/08-spiking_neural_systems.jmd (#327) (@github-actions[bot])
  • Rebuild model_inference/02-monte_carlo_parameter_estim.jmd (#328) (@github-actions[bot])
  • CompatHelper: bump compat for "Distributions" to "0.24" for package DiffEqUncertainty (#335) (@github-actions[bot])
  • CompatHelper: bump compat for "Distributions" to "0.24" for package model_inference (#336) (@github-actions[bot])
  • CompatHelper: bump compat for "Distributions" to "0.24" for package models (#337) (@github-actions[bot])
  • Rebuild type_handling/03-unitful.jmd (#345) (@github-actions[bot])
  • Rebuild model_inference/01-pendulum_bayesian_inference.jmd (#346) (@github-actions[bot])
  • CompatHelper: bump compat for "ModelingToolkit" to "4.0" for package advanced (#347) (@github-actions[bot])
  • CompatHelper: bump compat for "ModelingToolkit" to "4.0" for package models (#348) (@github-actions[bot])
  • CompatHelper: bump compat for "ModelingToolkit" to "4.0" for package ode_extras (#349) (@github-actions[bot])
  • MassInstallAction: Install the TagBot workflow on this repository (#350) (@christopher-dG)
  • CompatHelper: bump compat for "Catalyst" to "6.0" for package models (#351) (@github-actions[bot])
  • MassInstallAction: Install the GitHubActionsCI workflow on this repository (#356) (@christopher-dG)
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