Skip to content

ReactionMechanismGenerator/pyrms

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

83 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Py-RMS - Python Reaction Mechanism Simulator

Build status codecov

Python wrapper for the Reaction Mechanism Simulator (RMS) package for simulating and analyzing large chemical reaction mechanisms.

In theory this wraps all functionality within RMS with two caveats:

  1. In jupyter notebooks julia objects don't display the same way in the python kernel as they would in the julia kernel. For example flux diagram generation had to be hard coded into this wrapper to display properly. If this happens please make an issue.

  2. There are ways to define julia functions that makes them impossible to call from python. In most cases this is easy to fix. If you find a case where this happens please make an issue.

Installation Instructions from Anaconda:

We recommend installing pyrms in its own conda environment

To Install Binaries with Conda Run:

conda install -c rmg pyrms

Note the install process occurs automatically on your first import.