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[SPARQL - DELETE] amélioration de l’exception levée par le service de…
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…lete de SPARQL quand on passe une uri qui n'existe pas
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ROUX YVAN committed Jan 5, 2024
1 parent 3abe250 commit e50cd3c
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Showing 42 changed files with 145 additions and 145 deletions.
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import org.opensilex.nosql.mongodb.MongoDBService;
import org.opensilex.security.account.dal.AccountModel;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.server.exceptions.BadRequestException;
import org.opensilex.server.response.ErrorResponse;
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import org.opensilex.security.account.dal.AccountModel;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.ForbiddenURIAccessException;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.server.exceptions.BadRequestException;
import org.opensilex.sparql.ontology.dal.OntologyDAO;
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import org.opensilex.nosql.mongodb.MongoDBService;
import org.opensilex.security.account.dal.AccountModel;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.sparql.service.SPARQLService;
import org.opensilex.utils.ListWithPagination;
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.server.response.ErrorResponse;
import org.opensilex.server.response.ObjectUriResponse;
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import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.exceptions.BadRequestException;
import org.opensilex.server.response.*;
import org.opensilex.server.rest.validation.ValidURI;
import org.opensilex.server.rest.validation.date.ValidOffsetDateTime;
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.server.exceptions.NotFoundException;
import org.opensilex.server.response.*;
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import org.opensilex.security.account.dal.AccountDAO;
import org.opensilex.security.account.dal.AccountModel;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.response.ObjectUriResponse;
import org.opensilex.sparql.SPARQLModule;
import org.opensilex.sparql.model.SPARQLTreeListModel;
import org.opensilex.sparql.ontology.dal.ClassModel;
Expand All @@ -44,21 +43,16 @@
import org.opensilex.nosql.exceptions.NoSQLInvalidUriListException;
import org.opensilex.nosql.exceptions.NoSQLTooLargeSetException;
import org.opensilex.nosql.mongodb.MongoDBService;
import org.opensilex.security.account.dal.AccountModel;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.server.exceptions.NotFoundException;
import org.opensilex.server.response.ErrorResponse;
import org.opensilex.server.response.PaginatedListResponse;
import org.opensilex.server.response.SingleObjectResponse;
import org.opensilex.server.rest.serialization.ObjectMapperContextResolver;
import org.opensilex.sparql.SPARQLModule;
import org.opensilex.sparql.deserializer.SPARQLDeserializers;
import org.opensilex.sparql.model.SPARQLTreeListModel;
import org.opensilex.sparql.ontology.dal.ClassModel;
import org.opensilex.sparql.ontology.dal.OntologyDAO;
import org.opensilex.sparql.ontology.store.OntologyStore;
import org.opensilex.sparql.response.CreatedUriResponse;
import org.opensilex.sparql.service.SPARQLService;
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import org.opensilex.sparql.csv.DefaultCsvImporter;
import org.opensilex.sparql.csv.validation.CachedCsvImporter;
import org.opensilex.sparql.deserializer.SPARQLDeserializers;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.sparql.exceptions.SPARQLAlreadyExistingUriException;
import org.opensilex.sparql.response.CreatedUriResponse;
import org.opensilex.sparql.response.NamedResourceDTO;
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import org.opensilex.fs.service.FileStorageService;
import org.opensilex.nosql.mongodb.MongoDBService;
import org.opensilex.security.account.dal.AccountModel;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.server.exceptions.BadRequestException;
import org.opensilex.sparql.deserializer.SPARQLDeserializers;
import org.opensilex.sparql.exceptions.SPARQLException;
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.exceptions.InvalidValueException;
import org.opensilex.server.exceptions.BadRequestException;
import org.opensilex.server.response.ErrorResponse;
import org.opensilex.server.response.ObjectUriResponse;
import org.opensilex.server.response.PaginatedListResponse;
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import org.opensilex.sparql.csv.CSVValidationModel;
import org.opensilex.sparql.model.SPARQLResourceModel;
import org.opensilex.sparql.ontology.dal.OntologyDAO;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.sparql.deserializer.URIDeserializer;
import org.opensilex.sparql.exceptions.SPARQLInvalidClassDefinitionException;
import org.opensilex.sparql.exceptions.SPARQLMapperNotFoundException;
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.response.*;
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import org.opensilex.nosql.mongodb.MongoDBService;
import org.opensilex.security.account.dal.AccountModel;
import org.opensilex.security.authentication.ForbiddenURIAccessException;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.SecurityOntology;
import org.opensilex.sparql.deserializer.SPARQLDeserializers;
import org.opensilex.sparql.deserializer.URIDeserializer;
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import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.response.*;
import org.opensilex.sparql.SPARQLModule;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.sparql.exceptions.SPARQLAlreadyExistingUriException;
import org.opensilex.sparql.exceptions.SPARQLInvalidURIException;
import org.opensilex.sparql.model.SPARQLTreeListModel;
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.response.*;
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import org.opensilex.core.germplasm.api.GermplasmSearchFilter;
import org.opensilex.core.germplasm.dal.GermplasmDAO;
import org.opensilex.core.germplasm.dal.GermplasmModel;
import org.opensilex.core.germplasmGroup.api.GermplasmGroupCreationDTO;
import org.opensilex.core.germplasmGroup.api.GermplasmGroupGetDTO;
import org.opensilex.core.germplasmGroup.api.GermplasmGroupUpdateDTO;
import org.opensilex.core.germplasmGroup.dal.GermplasmGroupDAO;
import org.opensilex.core.germplasmGroup.dal.GermplasmGroupModel;
import org.opensilex.nosql.mongodb.MongoDBService;
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.response.*;
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import org.opensilex.security.account.dal.AccountModel;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.server.exceptions.NotFoundException;
import org.opensilex.server.response.ErrorResponse;
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import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.exceptions.BadRequestException;
import org.opensilex.server.exceptions.ConflictException;
import org.opensilex.server.exceptions.NotFoundException;
import org.opensilex.server.response.*;
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import org.opensilex.nosql.mongodb.MongoDBService;
import org.opensilex.security.account.dal.AccountModel;
import org.opensilex.security.authentication.ForbiddenURIAccessException;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.server.exceptions.BadRequestException;
import org.opensilex.sparql.deserializer.SPARQLDeserializers;
import org.opensilex.sparql.mapping.SPARQLListFetcher;
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import org.opensilex.core.organisation.dal.site.SiteModel;
import org.opensilex.core.organisation.dal.site.SiteSearchFilter;
import org.opensilex.core.organisation.exception.SiteFacilityInvalidAddressException;
import org.opensilex.core.variablesGroup.dal.VariablesGroupDAO;
import org.opensilex.nosql.mongodb.MongoDBService;
import org.opensilex.security.account.dal.AccountModel;
import org.opensilex.security.authentication.ForbiddenURIAccessException;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.sparql.deserializer.SPARQLDeserializers;
import org.opensilex.sparql.model.SPARQLResourceModel;
import org.opensilex.sparql.service.SPARQLQueryHelper;
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import org.opensilex.nosql.mongodb.MongoDBService;
import org.opensilex.security.account.dal.AccountModel;
import org.opensilex.security.authentication.ForbiddenURIAccessException;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.server.exceptions.BadRequestException;
import org.opensilex.server.exceptions.NotFoundException;
import org.opensilex.sparql.deserializer.SPARQLDeserializers;
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import com.mongodb.MongoQueryException;
import com.mongodb.client.FindIterable;
import io.swagger.annotations.*;
import io.swagger.util.Json;
import org.geojson.GeoJsonObject;
import org.glassfish.jersey.media.multipart.FormDataParam;
import org.opensilex.core.event.dal.EventModel;
import org.opensilex.core.event.dal.EventSearchFilter;
import org.opensilex.core.event.dal.move.MoveEventDAO;
Expand All @@ -18,13 +16,12 @@
import org.opensilex.nosql.mongodb.MongoDBService;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.account.dal.AccountModel;
import org.opensilex.server.response.ErrorResponse;
import org.opensilex.server.response.PaginatedListResponse;
import org.opensilex.server.response.SingleObjectResponse;
import org.opensilex.server.rest.serialization.ObjectMapperContextResolver;
import org.opensilex.server.rest.validation.ValidURI;
import org.opensilex.server.rest.validation.date.ValidOffsetDateTime;
import org.opensilex.sparql.service.SPARQLService;
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.person.dal.PersonModel;
import org.opensilex.security.user.api.UserGetDTO;
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//******************************************************************************
package org.opensilex.core.scientificObject.api;

import com.fasterxml.jackson.core.JsonProcessingException;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.mongodb.MongoWriteException;
import com.mongodb.client.FindIterable;
import com.mongodb.client.model.geojson.Geometry;
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import org.glassfish.jersey.media.multipart.FormDataParam;
import org.opensilex.core.csv.api.CSVValidationDTO;
import org.opensilex.core.data.api.CriteriaDTO;
import org.opensilex.core.data.api.SingleCriteriaDTO;
import org.opensilex.core.data.dal.DataDAO;
import org.opensilex.core.event.dal.move.MoveEventDAO;
import org.opensilex.core.event.dal.move.MoveModel;
Expand All @@ -46,9 +43,11 @@
import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.exceptions.BadRequestException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.server.exceptions.displayable.DisplayableBadRequestException;
import org.opensilex.server.response.*;
import org.opensilex.server.rest.validation.Date;
Expand Down Expand Up @@ -640,7 +639,7 @@ public Response updateScientificObject(
}
throw mongoException;
}catch (DuplicateNameException e){
throw new IllegalArgumentException(e.getMessage());
throw new BadRequestException(e.getMessage());
}
catch (Exception ex) {
sparql.rollbackTransaction();
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.response.*;
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import java.net.URISyntaxException;
import java.nio.file.Paths;
import java.time.LocalDate;
import java.time.OffsetDateTime;
import java.time.format.DateTimeFormatter;
import java.util.*;
import java.util.stream.Collectors;
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.response.*;
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.response.*;
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.response.*;
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.response.*;
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import org.opensilex.security.authentication.ApiCredential;
import org.opensilex.security.authentication.ApiCredentialGroup;
import org.opensilex.security.authentication.ApiProtected;
import org.opensilex.security.authentication.NotFoundURIException;
import org.opensilex.server.exceptions.NotFoundURIException;
import org.opensilex.security.authentication.injection.CurrentUser;
import org.opensilex.security.user.api.UserGetDTO;
import org.opensilex.server.response.*;
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