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use shared workflow submited in https://github.com/Open-Systems-Pharm… #1458

Merged
merged 109 commits into from
Jul 23, 2024
Merged

use shared workflow submited in https://github.com/Open-Systems-Pharm… #1458

merged 109 commits into from
Jul 23, 2024

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Felixmil
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@Felixmil Felixmil commented Jul 19, 2024 •
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Lot of commits in the list due to merge but essentially, this only:

PavelBal and others added 30 commits March 1, 2024 09:40
@PavelBal
Added authors to _pkgdown.yml
64b2904
@PavelBal
- Exchange rClr for rSharp as dependency
c3aa982
@PavelBal
Docs
cb252aa
@PavelBal
Replace all calls to rClr by calls to rShapr
a9ff16f
@PavelBal
Replace clrLoadAssembly by loadAssembly
afa99c5
@PavelBal
- Replace rClrCallStatic by callStatic
5e6ef83 
- Run docs
@PavelBal
getEnumNames
0900614 
Docs
@PavelBal
Use correct package reference in test
d17ffd0
@PavelBal
- Remove enc2utf, as conversion is done in rSharp
7726ebc
@PavelBal
Moved some wrappers to NetObject in rSharp
c4ea6f6
@PavelBal
Loading package works
ec28d58
@PavelBal
.wrapProperty
4f3f2b5
@PavelBal
Replace all clrGet
d2f0e17
@PavelBal
Replace all clrSet
44901ff
@PavelBal
Replace clrCall
904681c
@PavelBal
Replace clrNew
2cfd437
@PavelBal
DotNetWrapper expects a NetObject and not a pointer.
ea2db97
@PavelBal
Remove ref
7f40e86
@PavelBal
Fix all initilialize
c2e4b54
@PavelBal
Remove direct pointers
6b78e5b
@PavelBal
Styler
58777e4
@PavelBal
Documentation
4698e28
@PavelBal
Correct calling of private print methods
98da2e8
@PavelBal
Prepend '.' to wrapPropertyReadOnly
379610f
@PavelBal
Prepend '.' to throwPropertyISREadONly
533aa3d
@PavelBal
Fix test for dotNetWrapper
cbd6af7
@PavelBal
Fix clrGetType to getType
ddf7295
@rwmcintosh
use NPOI for .NET Core
9d5057e
@PavelBal
Fix .wrapProperty
9e35238
@PavelBal
Fix print calls in DataCombined
8e8e505
PavelBal and others added 20 commits July 17, 2024 15:29
@PavelBal
Fix population vignette failing
8965aa9
@PavelBal
Merge branch 'main' into r-sharp-r6
6850882
@Felixmil
Pksim installation vignette (#1456)
3d67842 
* usethis::use_vignette("PKSim-installation")
+ reference vignette in _pkgdown.yml
+ write vignette content

* add mention to the core files update script
@PavelBal
Merge branch 'main' into r-sharp-r6
9f290b9
@github-actions
🤖 Update Core Files.
32f99ee
@Felixmil
Increment version number to 12.1.0
1e8930a
@Felixmil
Merge branch 'r-sharp-r6' of https://github.com/Open-Systems-Pharmaco…
6822b87 
…logy/OSPSuite-R into r-sharp-r6

# Conflicts:
#	DESCRIPTION
@Felixmil
use shared workflow submited in Open-Systems-Pharmacology/Workflows#33
7218542
@Felixmil
fix reusable workflow call
17ebe44
@Felixmil
fix path
14d3d48
@Felixmil
use action from main branch in fork
246c8cd
@Felixmil
explicitely use @main
9de7001
@Felixmil
fix workflow name
cdc868d
@Felixmil
fix file name
592695e
@Felixmil
pass secret in specific argument
483dd3d
@Felixmil
increase permissions level
71f9495
@Felixmil
add read-all for all workflows
df715d7
@Felixmil
add write permission for update-core-files
08a3b34
@Felixmil
add write permission for all nested workflows
10b8b54
@github-actions
🤖 Update Core Files.
60a60a0
Base automatically changed from r-sharp-r6 to main July 23, 2024 13:46
@Felixmil
Merge commit 'f610a38f5a9878f8e13d2a0445066cbe1077167d'
7f36da0 
#Conflicts:
#	.github/workflows/main-workflow.yaml
#	DESCRIPTION
#	R/init-package.R
#	_pkgdown.yml
#	inst/lib/ConsoleApp.deps.json
#	inst/lib/ConsoleApp.dll
#	inst/lib/PKSim.Assets.Images.dll
#	inst/lib/PKSim.Assets.dll
#	inst/lib/PKSim.CLI.Core.dll
#	inst/lib/PKSim.Core.dll
#	inst/lib/PKSim.Infrastructure.dll
#	inst/lib/PKSim.Presentation.dll
#	inst/lib/PKSim.R.dll
#	inst/lib/PKSimDB.sqlite
#	tests/testthat/test-utilities-population.R
@Felixmil
replace fork actions with OSP/workflows actions
6efb1ca
@Felixmil
Merge branch 'no-jekyll' into use-shared-workflows
fd26056
@Felixmil
remove merge leftover
00a36a0
@Felixmil Felixmil marked this pull request as ready for review July 23, 2024 14:27
@Felixmil Felixmil requested a review from PavelBal July 23, 2024 14:27
@Felixmil Felixmil merged commit 62c9f88 into main Jul 23, 2024
6 checks passed
@Felixmil Felixmil deleted the use-shared-workflows branch July 23, 2024 14:36
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4 participants
@Felixmil @PavelBal @rwmcintosh @Yuri05