Use GitHub App to push version bumps #1443
Merged
Commits on Apr 15, 2024
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+ remove Appveyor files + remove docs/ (will be build on gh-pages) + update badges
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Build the pkgdown website on PR
Will not push to gh-pages during PR, only when merged + remove unused action
Commits on Apr 16, 2024
Commits on May 21, 2024
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Merge commit '84db2e9bfce3004e4c30501186d99158e5df47f3'
#Conflicts: # appveyor-nightly.yml # appveyor.yml
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Commits on May 23, 2024
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Merge remote-tracking branch 'origin/develop' into implement-github-a…
…ctions # Conflicts: # docs/dev/LICENSE-text.html # docs/dev/articles/create-individual.html # docs/dev/articles/create-run-population.html # docs/dev/articles/create-run-population_files/figure-html/getOutputValues-1.png # docs/dev/articles/create-run-population_files/figure-html/getOutputValuesForIndividual-1.png # docs/dev/articles/data-combined-plotting.html # docs/dev/articles/data-combined-plotting_files/figure-html/unnamed-chunk-10-1.png # docs/dev/articles/data-combined-plotting_files/figure-html/unnamed-chunk-12-1.png # docs/dev/articles/data-combined-plotting_files/figure-html/unnamed-chunk-13-1.png # docs/dev/articles/data-combined-plotting_files/figure-html/unnamed-chunk-3-1.png # docs/dev/articles/data-combined-plotting_files/figure-html/unnamed-chunk-4-1.png # docs/dev/articles/data-combined-plotting_files/figure-html/unnamed-chunk-5-1.png # docs/dev/articles/data-combined-plotting_files/figure-html/unnamed-chunk-6-1.png # docs/dev/articles/data-combined-plotting_files/figure-html/unnamed-chunk-7-1.png # 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docs/dev/news/index.html # docs/dev/pkgdown.js # docs/dev/pkgdown.yml # docs/dev/reference/AgingData.html # docs/dev/reference/AllMatchingMethod.html # docs/dev/reference/AllPathsInMethod.html # docs/dev/reference/ApiConfig.html # docs/dev/reference/Application.html # docs/dev/reference/Cache.html # docs/dev/reference/CompareBy.html # docs/dev/reference/Container.html # docs/dev/reference/DataAggregationMethods.html # docs/dev/reference/DataColumn.html # docs/dev/reference/DataCombined.html # docs/dev/reference/DataErrorType.html # docs/dev/reference/DataImporterConfiguration.html # docs/dev/reference/DataRepository.html # docs/dev/reference/DataSet.html # docs/dev/reference/DefaultPlotConfiguration.html # docs/dev/reference/DotNetWrapper.html # docs/dev/reference/Entity.html # docs/dev/reference/Formula.html # docs/dev/reference/Gender.html # docs/dev/reference/HumanPopulation.html # docs/dev/reference/IndividualCharacteristics.html # docs/dev/reference/Interval.html # docs/dev/reference/Molecule.html # docs/dev/reference/MoleculeOntogeny.html # docs/dev/reference/MoleculeParameter.html # docs/dev/reference/ObjectBase.html # docs/dev/reference/OutputSchema.html # docs/dev/reference/OutputSelections.html # docs/dev/reference/PKParameter.html # docs/dev/reference/PKParameterSensitivity.html # docs/dev/reference/Parameter.html # docs/dev/reference/ParameterRange.html # docs/dev/reference/Population.html # docs/dev/reference/PopulationCharacteristics.html # docs/dev/reference/Quantity.html # docs/dev/reference/QuantityPKParameter.html # docs/dev/reference/QuantitySelection.html # docs/dev/reference/Rplot002.png # docs/dev/reference/Rplot003.png # docs/dev/reference/SensitivityAnalysis.html # docs/dev/reference/SensitivityAnalysisResults.html # docs/dev/reference/SensitivityAnalysisRunOptions.html # docs/dev/reference/Simulation.html # docs/dev/reference/SimulationBatch.html # docs/dev/reference/SimulationBatchOptions.html # docs/dev/reference/SimulationBatchRunValues.html # docs/dev/reference/SimulationPKAnalyses.html # docs/dev/reference/SimulationResults.html # docs/dev/reference/SimulationRunOptions.html # docs/dev/reference/SimulationSettings.html # docs/dev/reference/SnapshotParameter.html # docs/dev/reference/SolverSettings.html # docs/dev/reference/Species.html # docs/dev/reference/StandardContainer.html # docs/dev/reference/StandardOntogeny.html # docs/dev/reference/StandardPKParameter.html # docs/dev/reference/StandardPath.html # docs/dev/reference/UserDefinedPKParameter.html # docs/dev/reference/ValuePoint.html # docs/dev/reference/addOutputInterval.html # docs/dev/reference/addOutputs.html # docs/dev/reference/addUserDefinedPKParameter.html # docs/dev/reference/allAvailableDimensions.html # docs/dev/reference/allPKParameterNames.html # docs/dev/reference/calculatePKAnalyses.html # docs/dev/reference/calculateResiduals.html # docs/dev/reference/clearMemory.html # docs/dev/reference/clearOutputIntervals.html # docs/dev/reference/clearOutputs.html # docs/dev/reference/convertUnits.html # docs/dev/reference/createDistributions.html # docs/dev/reference/createImporterConfigurationForFile.html # docs/dev/reference/createIndividual.html # docs/dev/reference/createIndividualCharacteristics.html # docs/dev/reference/createPopulation.html # docs/dev/reference/createPopulationCharacteristics.html # docs/dev/reference/createSimulationBatch.html # docs/dev/reference/dataSetToDataFrame.html # docs/dev/reference/dot-ImporterErrorTypeToDataSetErrorType.html # docs/dev/reference/dot-addMissingGroupings.html # docs/dev/reference/dot-cleanVectorArgs.html # docs/dev/reference/dot-convertGeneralToSpecificPlotConfiguration.html # docs/dev/reference/dot-createAxesLabels.html # docs/dev/reference/dot-encodeUnit.html # docs/dev/reference/dot-expandPath.html # docs/dev/reference/dot-extractAggregatedSimulatedData.html # docs/dev/reference/dot-extractMostFrequentUnit.html # docs/dev/reference/dot-extractResidualsToTibble.html # docs/dev/reference/dot-geoRange.html # docs/dev/reference/dot-getAllEntitiesMatching.html # docs/dev/reference/dot-getAllEntityPathsIn.html # docs/dev/reference/dot-getConcurrentSimulationRunnerResults.html # docs/dev/reference/dot-getDimensionsEnum.html # docs/dev/reference/dot-getEntity.html # docs/dev/reference/dot-getNetTask.html # docs/dev/reference/dot-getNetTaskFromCache.html # docs/dev/reference/dot-getOspDimensions.html # docs/dev/reference/dot-getOspUnits.html # docs/dev/reference/dot-getPathToPKSimInstallDir.html # docs/dev/reference/dot-getPathToPKSimInstallDirFromFileSystem.html # docs/dev/reference/dot-getPathToPKSimInstallDirFromRegistry.html # docs/dev/reference/dot-getPropertyValue.html # docs/dev/reference/dot-getPropertyValues.html # docs/dev/reference/dot-getQuantityDisplayPaths.html # docs/dev/reference/dot-getUnitsEnum.html # docs/dev/reference/dot-initPackage.html # docs/dev/reference/dot-loadDataRepositoryFromPKML.html # docs/dev/reference/dot-makeDataFrameColumn.html # docs/dev/reference/dot-netEnumName.html # docs/dev/reference/dot-normRange.html # docs/dev/reference/dot-parameterValueListFrom.html # docs/dev/reference/dot-parseDimensionsXML.html # docs/dev/reference/dot-removeEmptyDataFrame.html # docs/dev/reference/dot-removeUnpairableDatasets.html # docs/dev/reference/dot-savePKAnalysesToCSV.html # docs/dev/reference/dot-savePopulationToCSV.html # docs/dev/reference/dot-saveResultsToCSV.html # docs/dev/reference/dot-saveSensitivityAnalysisResultsToCSV.html # docs/dev/reference/dot-scaleQuantityValues.html # docs/dev/reference/dot-setQuantityValues.html # docs/dev/reference/dot-toObjectType.html # docs/dev/reference/dot-unitConverter.html # docs/dev/reference/dot-validateHasUnit.html # docs/dev/reference/dot-validateScalarDataCombined.html # docs/dev/reference/exportIndividualSimulations.html # docs/dev/reference/exportPKAnalysesToCSV.html # docs/dev/reference/exportPopulationToCSV.html # docs/dev/reference/exportResultsToCSV.html # docs/dev/reference/exportSensitivityAnalysisResultsToCSV.html # docs/dev/reference/getAllContainerPathsIn.html # docs/dev/reference/getAllContainersMatching.html # docs/dev/reference/getAllMoleculePathsIn.html # docs/dev/reference/getAllMoleculesMatching.html # docs/dev/reference/getAllObserverPathsIn.html # docs/dev/reference/getAllParameterPathsIn.html # docs/dev/reference/getAllParametersForSensitivityAnalysisMatching.html # docs/dev/reference/getAllParametersMatching.html # docs/dev/reference/getAllQuantitiesMatching.html # docs/dev/reference/getAllQuantityPathsIn.html # docs/dev/reference/getAllStateVariableParametersPaths.html # docs/dev/reference/getAllStateVariablesPaths.html # docs/dev/reference/getBaseUnit.html # docs/dev/reference/getContainer.html # docs/dev/reference/getDimensionByName.html # docs/dev/reference/getDimensionForUnit.html # docs/dev/reference/getMolecule.html # docs/dev/reference/getOSPSuiteSetting.html # docs/dev/reference/getOutputValues.html # docs/dev/reference/getParameter.html # docs/dev/reference/getParameterDisplayPaths.html # docs/dev/reference/getQuantity.html # docs/dev/reference/getQuantityValuesByPath.html # docs/dev/reference/getSimulationTree.html # docs/dev/reference/getStandardMoleculeParameters.html # docs/dev/reference/getUnitsForDimension.html # docs/dev/reference/hasDimension.html # docs/dev/reference/hasUnit.html # docs/dev/reference/importPKAnalysesFromCSV.html # docs/dev/reference/importResultsFromCSV.html # docs/dev/reference/importSensitivityAnalysisResultsFromCSV.html # docs/dev/reference/index.html # docs/dev/reference/initPKSim.html # docs/dev/reference/isExplicitFormulaByPath.html # docs/dev/reference/loadAgingDataFromCSV.html # docs/dev/reference/loadDataImporterConfiguration.html # docs/dev/reference/loadDataSetFromPKML.html # docs/dev/reference/loadDataSetsFromExcel.html # docs/dev/reference/loadPopulation.html # docs/dev/reference/loadSimulation.html # docs/dev/reference/messages.html # docs/dev/reference/ospDimensions.html # docs/dev/reference/ospUnits.html # docs/dev/reference/ospsuiteSettingNames.html # docs/dev/reference/ospsuite_deprecated.html # docs/dev/reference/pkAnalysesToDataFrame.html # docs/dev/reference/pkParameterByName.html # docs/dev/reference/plotIndividualTimeProfile-1.png # docs/dev/reference/plotIndividualTimeProfile.html # docs/dev/reference/plotObservedVsSimulated-1.png # docs/dev/reference/plotObservedVsSimulated.html # docs/dev/reference/plotPopulationTimeProfile-1.png # docs/dev/reference/plotPopulationTimeProfile-2.png # docs/dev/reference/plotPopulationTimeProfile-3.png # docs/dev/reference/plotPopulationTimeProfile.html # docs/dev/reference/plotResidualsVsSimulated-1.png # docs/dev/reference/plotResidualsVsSimulated.html # docs/dev/reference/plotResidualsVsTime-1.png # docs/dev/reference/plotResidualsVsTime.html # docs/dev/reference/populationToDataFrame.html # docs/dev/reference/potentialVariableParameterPathsFor.html # docs/dev/reference/reexports.html # docs/dev/reference/removeAllUserDefinedPKParameters.html # docs/dev/reference/removeSimulationFromCache.html # docs/dev/reference/resetSimulationCache.html # docs/dev/reference/runSensitivityAnalysis.html # docs/dev/reference/runSimulation.html # docs/dev/reference/runSimulationBatches.html # docs/dev/reference/runSimulations.html # docs/dev/reference/saveDataSetToPKML.html # docs/dev/reference/saveSimulation.html # docs/dev/reference/scaleParameterValues.html # docs/dev/reference/setMoleculeInitialValues.html # docs/dev/reference/setMoleculeScaleDivisors.html # docs/dev/reference/setMoleculeValuesByPath.html # docs/dev/reference/setOutputInterval.html # docs/dev/reference/setOutputs.html # docs/dev/reference/setParameterValues.html # docs/dev/reference/setParameterValuesByPath.html # docs/dev/reference/setQuantityValuesByPath.html # docs/dev/reference/simulationResultsToDataFrame.html # docs/dev/reference/splitPopulationFile.html # docs/dev/reference/toBaseUnit.html # docs/dev/reference/toDisplayUnit.html # docs/dev/reference/toPathArray.html # docs/dev/reference/toPathString.html # docs/dev/reference/toUnit.html # docs/dev/reference/uniqueEntities.html # docs/dev/reference/updatePKParameter.html # docs/dev/reference/validateDimension.html # docs/dev/reference/validateUnit.html # docs/dev/search.json # docs/dev/sitemap.xml
Commits on Jul 2, 2024
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Merge commit '81e45982242f9840108c994c34b34eb0440e11d3'
#Conflicts: # appveyor-nightly.yml # appveyor.yml
Commits on Jul 3, 2024
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Add a workflow step to increase dev version automatically
+ refactor all jobs in one main workflow
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add dependency between version change and RCMD Check
+ rename to "bump..."
Commits on Jul 4, 2024
Commits on Jul 8, 2024
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Merge commit 'c8d202be3b72ce6dbd83bae80f276e3fdf941260'
#Conflicts: # .github/workflows/bump-dev-version.yaml # .github/workflows/main-workflow.yaml
Commits on Jul 15, 2024
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trigger main-workflow on any PR
+ remove trigger on "develop" branch
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