This repository has been archived by the owner on Jul 17, 2023. It is now read-only.
manta-0.22.0
Changes since v0.21.0 primarily focus on further improvements to long insertion detection
- A new path-finding method for the assembler which reduces haplotype switching and early path termination
- Several related alignment and scoring changes have been added to support large insertion calling
- Manta now automatically produces a starling/strelka candidates file for sizes 50 and below, and provides a script for other size choices.