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This repository has been archived by the owner on Jul 17, 2023. It is now read-only.

manta-0.13.0

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@ctsa ctsa released this 12 Nov 15:27
· 1647 commits to master since this release
  • MANTA-63 Incorporate read-pair evidence into small SVs/indels
  • MANTA-77 Fix assertion for rna-seq test
  • MANTA-17 Include semi-aligned reads in discovery and scoring
  • MANTA-69 Update score/write filter to account for CIGAR and SA-read
    candidates, and new uniform candidate scheme for self-edges.
  • MANTA-70 Correct filters to allow for small inversion and tandem dup
    detection
  • MANTA-68 SVLEN not set correctly for non-deletions
  • MANTA-64 Improve candidate generation for small regions
  • MANTA-43 allow manta installation to be relocated
  • MANTA-55 compile python code as part of build/install