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update README
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shajoezhu committed Aug 28, 2016
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Expand Up @@ -11,22 +11,31 @@ Please see the [documentation](http://deploid.readthedocs.io/en/latest/) for fur
Installation
------------

You can also install `dEploid` directly from the git repository. Here, you need to install `autoconf` first:
You can also install `dEploid` directly from the git repository. Here, you will need `autoconf`, check whether this is already installed by running:
```bash
$ which autoconf
```

On Debian/Ubuntu based systems:
```bash
apt-get install build-essential autoconf autoconf-archive libcppunit-dev
$ apt-get install build-essential autoconf autoconf-archive libcppunit-dev
```

On Mac OS:
```bash
port install automake autoconf autoconf-archive cppunit
$ port install automake autoconf autoconf-archive cppunit
```

Afterwards you can clone the code from the github repository,
```bash
$ git clone git@github.com:mcveanlab/DEploid.git
$ cd DEploid
```

Afterwards you can build the binary using
and build the binary using
```bash
./bootstrap
make
$ ./bootstrap
$ make
```

Usage
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