hal2vg 2024-08-12

hal2vg 1.1.8 is available in the following forms:

• Static Linux Binary: hal2vg (Don't forget to mark it executable: chmod +x hal2vg); also clip-vg, halRemoveDupes, halMergeChroms, halUnclip,filter-paf-deletions count-vg-hap-cov
• Source Tarball: hal2vg-v1.1.8.tar.gz
  Install instructions in README.md

WARNING: do not use the github automatically generated source files (Source code (zip) or Source code (tar.gz)), these are not correct.

Release notes

• clip-vg -c option added to not fail when trying to forwardize reference paths with cycles