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upload memtest results
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github-action committed Oct 8, 2024
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73 changes: 73 additions & 0 deletions log-files/2024-10-08_17-23-11/Test1D3DLinearEllipticSolver_valgrind.txt
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==25029== Memcheck, a memory error detector
==25029== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==25029== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==25029== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/Test1D3DLinearEllipticSolver -malloc_debug -malloc_dump -memory_info
==25029== Parent PID: 24004
==25029==
==25029==
==25029== FILE DESCRIPTORS: 9 open (3 std) at exit.
==25029== Open file descriptor 12:
==25029== at 0x84EF07D: pipe (pipe.c:29)
==25029== by 0x104DE07D: ???
==25029== by 0xC3754CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==25029== by 0x8B54418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==25029== by 0x8AEDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==25029== by 0x6AB4D38: PetscInitialize (pinit.c:924)
==25029== by 0x698B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==25029== by 0x698B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==25029== by 0x165094: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==25029== by 0x15FF33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==25029== by 0x162CEC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==25029== by 0x162BE7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==25029== by 0x1631FB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==25029== by 0x15E735: main (Test1D3DLinearEllipticSolver.cpp:18)
==25029==
==25029== Open file descriptor 8: /dev/shm/open_mpi.0000
==25029== at 0x84F3A1C: __open_nocancel (open64_nocancel.c:39)
==25029== by 0x8477BCF: shm_open@@GLIBC_2.34 (shm_open.c:40)
==25029== by 0x7D44822: ???
==25029== by 0x7D4496F: ???
==25029== by 0xC41A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==25029== by 0xC41A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==25029== by 0xC3D0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==25029== by 0xC3752DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==25029== by 0x8B54418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==25029== by 0x8AEDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==25029== by 0x6AB4D38: PetscInitialize (pinit.c:924)
==25029== by 0x698B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==25029== by 0x698B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==25029== by 0x165094: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==25029== by 0x15FF33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==25029== by 0x162CEC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==25029== by 0x162BE7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==25029== by 0x1631FB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==25029== by 0x15E735: main (Test1D3DLinearEllipticSolver.cpp:18)
==25029==
==25029== Open file descriptor 116:
==25029== <inherited from parent>
==25029==
==25029== Open file descriptor 113:
==25029== <inherited from parent>
==25029==
==25029== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test1D3DLinearEllipticSolver_valgrind.txt
==25029== <inherited from parent>
==25029==
==25029== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==25029== <inherited from parent>
==25029==
==25029==
==25029== HEAP SUMMARY:
==25029== in use at exit: 618,258 bytes in 8,238 blocks
==25029== total heap usage: 51,119 allocs, 42,881 frees, 1,339,258,919 bytes allocated
==25029==
==25029== LEAK SUMMARY:
==25029== definitely lost: 0 bytes in 0 blocks
==25029== indirectly lost: 0 bytes in 0 blocks
==25029== possibly lost: 0 bytes in 0 blocks
==25029== still reachable: 24 bytes in 2 blocks
==25029== suppressed: 618,234 bytes in 8,236 blocks
==25029== Reachable blocks (those to which a pointer was found) are not shown.
==25029== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==25029==
==25029== For lists of detected and suppressed errors, rerun with: -s
==25029== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)
73 changes: 73 additions & 0 deletions log-files/2024-10-08_17-23-11/Test1dMonodomainShannonCvodeBenchmarks_valgrind.txt
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==43422== Memcheck, a memory error detector
==43422== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==43422== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==43422== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/Test1dMonodomainShannonCvodeBenchmarks -malloc_debug -malloc_dump -memory_info
==43422== Parent PID: 24004
==43422==
==43422==
==43422== FILE DESCRIPTORS: 9 open (3 std) at exit.
==43422== Open file descriptor 12:
==43422== at 0xA7CE07D: pipe (pipe.c:29)
==43422== by 0x1432F07D: ???
==43422== by 0xFB364CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==43422== by 0xBEC7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==43422== by 0xBE60D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==43422== by 0xAB57D38: PetscInitialize (pinit.c:924)
==43422== by 0xA0B51D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==43422== by 0xA0B5227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==43422== by 0x1220FC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==43422== by 0x11D313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==43422== by 0x11F5E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==43422== by 0x11F4E2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==43422== by 0x11FAF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==43422== by 0x11BB15: main (Test1dMonodomainShannonCvodeBenchmarks.cpp:18)
==43422==
==43422== Open file descriptor 8: /dev/shm/open_mpi.0000
==43422== at 0xA7D2A1C: __open_nocancel (open64_nocancel.c:39)
==43422== by 0xA756BCF: shm_open@@GLIBC_2.34 (shm_open.c:40)
==43422== by 0xA0F0822: ???
==43422== by 0xA0F096F: ???
==43422== by 0xFBDB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==43422== by 0xFBDB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==43422== by 0xFB91922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==43422== by 0xFB362DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==43422== by 0xBEC7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==43422== by 0xBE60D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==43422== by 0xAB57D38: PetscInitialize (pinit.c:924)
==43422== by 0xA0B51D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==43422== by 0xA0B5227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==43422== by 0x1220FC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==43422== by 0x11D313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==43422== by 0x11F5E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==43422== by 0x11F4E2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==43422== by 0x11FAF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==43422== by 0x11BB15: main (Test1dMonodomainShannonCvodeBenchmarks.cpp:18)
==43422==
==43422== Open file descriptor 116:
==43422== <inherited from parent>
==43422==
==43422== Open file descriptor 113:
==43422== <inherited from parent>
==43422==
==43422== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test1dMonodomainShannonCvodeBenchmarks_valgrind.txt
==43422== <inherited from parent>
==43422==
==43422== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==43422== <inherited from parent>
==43422==
==43422==
==43422== HEAP SUMMARY:
==43422== in use at exit: 618,745 bytes in 8,244 blocks
==43422== total heap usage: 319,600 allocs, 311,356 frees, 1,398,098,645 bytes allocated
==43422==
==43422== LEAK SUMMARY:
==43422== definitely lost: 0 bytes in 0 blocks
==43422== indirectly lost: 0 bytes in 0 blocks
==43422== possibly lost: 0 bytes in 0 blocks
==43422== still reachable: 24 bytes in 2 blocks
==43422== suppressed: 618,721 bytes in 8,242 blocks
==43422== Reachable blocks (those to which a pointer was found) are not shown.
==43422== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==43422==
==43422== For lists of detected and suppressed errors, rerun with: -s
==43422== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 31)
73 changes: 73 additions & 0 deletions log-files/2024-10-08_17-23-11/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt
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Original file line number Diff line number Diff line change
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==26204== Memcheck, a memory error detector
==26204== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==26204== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==26204== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info
==26204== Parent PID: 24004
==26204==
==26204==
==26204== FILE DESCRIPTORS: 9 open (3 std) at exit.
==26204== Open file descriptor 12:
==26204== at 0xF80107D: pipe (pipe.c:29)
==26204== by 0x196B407D: ???
==26204== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==26204== by 0x114A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==26204== by 0x1143AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==26204== by 0x1012FD38: PetscInitialize (pinit.c:924)
==26204== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==26204== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==26204== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==26204== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==26204== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==26204== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==26204== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==26204== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19)
==26204==
==26204== Open file descriptor 8: /dev/shm/open_mpi.0000
==26204== at 0xF805A1C: __open_nocancel (open64_nocancel.c:39)
==26204== by 0xF789BCF: shm_open@@GLIBC_2.34 (shm_open.c:40)
==26204== by 0xF13F822: ???
==26204== by 0xF13F96F: ???
==26204== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==26204== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==26204== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==26204== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==26204== by 0x114A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==26204== by 0x1143AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==26204== by 0x1012FD38: PetscInitialize (pinit.c:924)
==26204== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==26204== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==26204== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==26204== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==26204== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==26204== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==26204== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==26204== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19)
==26204==
==26204== Open file descriptor 116:
==26204== <inherited from parent>
==26204==
==26204== Open file descriptor 113:
==26204== <inherited from parent>
==26204==
==26204== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt
==26204== <inherited from parent>
==26204==
==26204== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==26204== <inherited from parent>
==26204==
==26204==
==26204== HEAP SUMMARY:
==26204== in use at exit: 618,354 bytes in 8,239 blocks
==26204== total heap usage: 1,124,534 allocs, 1,116,295 frees, 1,415,928,149 bytes allocated
==26204==
==26204== LEAK SUMMARY:
==26204== definitely lost: 0 bytes in 0 blocks
==26204== indirectly lost: 0 bytes in 0 blocks
==26204== possibly lost: 0 bytes in 0 blocks
==26204== still reachable: 56 bytes in 3 blocks
==26204== suppressed: 618,298 bytes in 8,236 blocks
==26204== Reachable blocks (those to which a pointer was found) are not shown.
==26204== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==26204==
==26204== For lists of detected and suppressed errors, rerun with: -s
==26204== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)
73 changes: 73 additions & 0 deletions log-files/2024-10-08_17-23-11/TestAbstractAnalyticJacobian_valgrind.txt
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Original file line number Diff line number Diff line change
@@ -0,0 +1,73 @@
==24944== Memcheck, a memory error detector
==24944== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==24944== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==24944== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestAbstractAnalyticJacobian -malloc_debug -malloc_dump -memory_info
==24944== Parent PID: 24004
==24944==
==24944==
==24944== FILE DESCRIPTORS: 9 open (3 std) at exit.
==24944== Open file descriptor 12:
==24944== at 0x4F1007D: pipe (pipe.c:29)
==24944== by 0xB1E607D: ???
==24944== by 0x8CDE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==24944== by 0x6678418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==24944== by 0x6611D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==24944== by 0x5308D38: PetscInitialize (pinit.c:924)
==24944== by 0x4B3C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==24944== by 0x4B3C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==24944== by 0x117D7C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==24944== by 0x11320F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==24944== by 0x11560C: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==24944== by 0x115507: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==24944== by 0x115B1B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==24944== by 0x111715: main (TestAbstractAnalyticJacobian.cpp:18)
==24944==
==24944== Open file descriptor 8: /dev/shm/open_mpi.0000
==24944== at 0x4F14A1C: __open_nocancel (open64_nocancel.c:39)
==24944== by 0x4E98BCF: shm_open@@GLIBC_2.34 (shm_open.c:40)
==24944== by 0x4B77822: ???
==24944== by 0x4B7796F: ???
==24944== by 0x8D836DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==24944== by 0x8D83938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==24944== by 0x8D39922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==24944== by 0x8CDE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==24944== by 0x6678418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==24944== by 0x6611D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==24944== by 0x5308D38: PetscInitialize (pinit.c:924)
==24944== by 0x4B3C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==24944== by 0x4B3C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==24944== by 0x117D7C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==24944== by 0x11320F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==24944== by 0x11560C: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==24944== by 0x115507: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==24944== by 0x115B1B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==24944== by 0x111715: main (TestAbstractAnalyticJacobian.cpp:18)
==24944==
==24944== Open file descriptor 116:
==24944== <inherited from parent>
==24944==
==24944== Open file descriptor 113:
==24944== <inherited from parent>
==24944==
==24944== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAbstractAnalyticJacobian_valgrind.txt
==24944== <inherited from parent>
==24944==
==24944== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==24944== <inherited from parent>
==24944==
==24944==
==24944== HEAP SUMMARY:
==24944== in use at exit: 617,906 bytes in 8,238 blocks
==24944== total heap usage: 45,031 allocs, 36,793 frees, 1,338,169,452 bytes allocated
==24944==
==24944== LEAK SUMMARY:
==24944== definitely lost: 0 bytes in 0 blocks
==24944== indirectly lost: 0 bytes in 0 blocks
==24944== possibly lost: 0 bytes in 0 blocks
==24944== still reachable: 24 bytes in 2 blocks
==24944== suppressed: 617,882 bytes in 8,236 blocks
==24944== Reachable blocks (those to which a pointer was found) are not shown.
==24944== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==24944==
==24944== For lists of detected and suppressed errors, rerun with: -s
==24944== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)
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