deploy: 857a28a

BradyAJohnston · Sep 14, 2023 · ffb5e21 · ffb5e21
1 parent 3e8a723
commit ffb5e21
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Showing 27 changed files with 1,083 additions and 1,297 deletions.
diff --git a/.nojekyll b/.nojekyll
@@ -1 +0,0 @@
-52fd569f

diff --git a/examples.html b/examples.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.330">
+<meta name="generator" content="quarto-1.4.358">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -22,7 +22,7 @@
 }
 /* CSS for syntax highlighting */
 pre > code.sourceCode { white-space: pre; position: relative; }
-pre > code.sourceCode > span { display: inline-block; line-height: 1.25; }
+pre > code.sourceCode > span { line-height: 1.25; }
 pre > code.sourceCode > span:empty { height: 1.2em; }
 .sourceCode { overflow: visible; }
 code.sourceCode > span { color: inherit; text-decoration: inherit; }
@@ -87,6 +87,7 @@
     "/",
     "s"
   ],
+  "show-item-context": false,
   "language": {
     "search-no-results-text": "No results",
     "search-matching-documents-text": "matching documents",

diff --git a/index.html b/index.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.330">
+<meta name="generator" content="quarto-1.4.358">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -53,6 +53,7 @@
     "/",
     "s"
   ],
+  "show-item-context": false,
   "language": {
     "search-no-results-text": "No results",
     "search-matching-documents-text": "matching documents",

diff --git a/installation.html b/installation.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.330">
+<meta name="generator" content="quarto-1.4.358">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -22,7 +22,7 @@
 }
 /* CSS for syntax highlighting */
 pre > code.sourceCode { white-space: pre; position: relative; }
-pre > code.sourceCode > span { display: inline-block; line-height: 1.25; }
+pre > code.sourceCode > span { line-height: 1.25; }
 pre > code.sourceCode > span:empty { height: 1.2em; }
 .sourceCode { overflow: visible; }
 code.sourceCode > span { color: inherit; text-decoration: inherit; }
@@ -87,6 +87,7 @@
     "/",
     "s"
   ],
+  "show-item-context": false,
   "language": {
     "search-no-results-text": "No results",
     "search-matching-documents-text": "matching documents",

diff --git a/nodes.html b/nodes.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.330">
+<meta name="generator" content="quarto-1.4.358">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -53,6 +53,7 @@
     "/",
     "s"
   ],
+  "show-item-context": false,
   "language": {
     "search-no-results-text": "No results",
     "search-matching-documents-text": "matching documents",

diff --git a/reference/assembly.html b/reference/assembly.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.330">
+<meta name="generator" content="quarto-1.4.358">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -53,6 +53,7 @@
     "/",
     "s"
   ],
+  "show-item-context": false,
   "language": {
     "search-no-results-text": "No results",
     "search-matching-documents-text": "matching documents",

diff --git a/reference/coll.html b/reference/coll.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.330">
+<meta name="generator" content="quarto-1.4.358">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -53,6 +53,7 @@
     "/",
     "s"
   ],
+  "show-item-context": false,
   "language": {
     "search-no-results-text": "No results",
     "search-matching-documents-text": "matching documents",
@@ -308,10 +309,10 @@ <h2 class="anchored" data-anchor-id="coll.data">data</h2>
 <h3 class="anchored" data-anchor-id="parameters">Parameters</h3>
 <table class="table">
 <colgroup>
-<col style="width: 9%">
-<col style="width: 18%">
-<col style="width: 59%">
-<col style="width: 13%">
+<col style="width: 10%">
+<col style="width: 10%">
+<col style="width: 64%">
+<col style="width: 14%">
 </colgroup>
 <thead>
 <tr class="header">
@@ -324,7 +325,7 @@ <h3 class="anchored" data-anchor-id="parameters">Parameters</h3>
 <tbody>
 <tr class="odd">
 <td><code>name</code></td>
-<td>str, optional</td>
+<td>str</td>
 <td>Name of the data collection. Default is “data”.</td>
 <td><code>'data'</code></td>
 </tr>
@@ -361,10 +362,10 @@ <h2 class="anchored" data-anchor-id="coll.frames">frames</h2>
 <h3 class="anchored" data-anchor-id="parameters-1">Parameters</h3>
 <table class="table">
 <colgroup>
-<col style="width: 5%">
-<col style="width: 19%">
-<col style="width: 68%">
 <col style="width: 6%">
+<col style="width: 14%">
+<col style="width: 72%">
+<col style="width: 7%">
 </colgroup>
 <thead>
 <tr class="header">
@@ -377,13 +378,13 @@ <h3 class="anchored" data-anchor-id="parameters-1">Parameters</h3>
 <tbody>
 <tr class="odd">
 <td><code>name</code></td>
-<td>str, optional</td>
+<td>str</td>
 <td>Name of the collection for the frames. Default is ““.</td>
 <td><code>''</code></td>
 </tr>
 <tr class="even">
 <td><code>parent</code></td>
-<td>bpy.types.Collection, optional</td>
+<td>bpy.types.Collection</td>
 <td>A blender collection which will become the parent collection. Default is the MolecularNodes collection if None.</td>
 <td><code>None</code></td>
 </tr>
@@ -416,8 +417,8 @@ <h2 class="anchored" data-anchor-id="coll.mn">mn</h2>
 <h3 class="anchored" data-anchor-id="returns-2">Returns</h3>
 <table class="table">
 <colgroup>
-<col style="width: 59%">
-<col style="width: 40%">
+<col style="width: 17%">
+<col style="width: 82%">
 </colgroup>
 <thead>
 <tr class="header">
@@ -428,11 +429,7 @@ <h3 class="anchored" data-anchor-id="returns-2">Returns</h3>
 <tbody>
 <tr class="odd">
 <td>bpy.types.Collection</td>
-<td>The ‘MolecularNodes’ collection inside the Blender scene. If it doesn’t</td>
-</tr>
-<tr class="even">
-<td>exist, it will be created.</td>
-<td></td>
+<td>The ‘MolecularNodes’ collection inside the Blender scene. If it doesn’t exist, it will be created.</td>
 </tr>
 </tbody>
 </table>

diff --git a/reference/data.html b/reference/data.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.4.330">
+<meta name="generator" content="quarto-1.4.358">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -53,6 +53,7 @@
     "/",
     "s"
   ],
+  "show-item-context": false,
   "language": {
     "search-no-results-text": "No results",
     "search-matching-documents-text": "matching documents",
@@ -257,10 +258,7 @@
     <h2 id="toc-title">On this page</h2>
 
   <ul class="collapse">
-  <li><a href="#data" id="toc-data" class="nav-link active" data-scroll-target="#data">data</a>
-  <ul class="collapse">
-  <li><a href="#attributes" id="toc-attributes" class="nav-link" data-scroll-target="#attributes">Attributes</a></li>
-  </ul></li>
+  <li><a href="#data" id="toc-data" class="nav-link active" data-scroll-target="#data">data</a></li>
   </ul>
 </nav>
     </div>
@@ -272,49 +270,8 @@ <h2 id="toc-title">On this page</h2>
 <section id="data" class="level1">
 <h1>data</h1>
 <p>``</p>
-<section id="attributes" class="level2">
-<h2 class="anchored" data-anchor-id="attributes">Attributes</h2>
-<table class="table">
-<thead>
-<tr class="header">
-<th>Name</th>
-<th>Description</th>
-</tr>
-</thead>
-<tbody>
-<tr class="odd">
-<td><a href="#data.SACCHARIDE_NAMES">SACCHARIDE_NAMES</a></td>
-<td></td>
-</tr>
-<tr class="even">
-<td><a href="#data.SACCHARIDE_REPRESENTATION">SACCHARIDE_REPRESENTATION</a></td>
-<td></td>
-</tr>
-<tr class="odd">
-<td><a href="#data.atom_charge">atom_charge</a></td>
-<td></td>
-</tr>
-<tr class="even">
-<td><a href="#data.atom_names">atom_names</a></td>
-<td></td>
-</tr>
-<tr class="odd">
-<td><a href="#data.elements">elements</a></td>
-<td></td>
-</tr>
-<tr class="even">
-<td><a href="#data.lipophobicity">lipophobicity</a></td>
-<td></td>
-</tr>
-<tr class="odd">
-<td><a href="#data.residues">residues</a></td>
-<td></td>
-</tr>
-</tbody>
-</table>
 
 
-</section>
 </section>
 
 </main> <!-- /main -->