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environment.yml
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environment.yml
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name: GenotypeImputationGRU
channels:
- pytorch
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- argon2-cffi=20.1.0=py38h27cfd23_1
- async_generator=1.10=pyhd3eb1b0_0
- attrs=20.3.0=pyhd3eb1b0_0
- backcall=0.2.0=pyhd3eb1b0_0
- blas=1.0=mkl
- bleach=3.3.0=pyhd3eb1b0_0
- bzip2=1.0.8=h7b6447c_0
- ca-certificates=2021.4.13=h06a4308_1
- certifi=2020.12.5=py38h06a4308_0
- cffi=1.14.5=py38h261ae71_0
- cudatoolkit=10.2.89=hfd86e86_1
- cycler=0.10.0=py38_0
- dbus=1.13.18=hb2f20db_0
- decorator=5.0.6=pyhd3eb1b0_0
- defusedxml=0.7.1=pyhd3eb1b0_0
- entrypoints=0.3=py38_0
- expat=2.3.0=h2531618_2
- ffmpeg=4.3=hf484d3e_0
- fontconfig=2.13.1=h6c09931_0
- freetype=2.10.4=h5ab3b9f_0
- glib=2.68.1=h36276a3_0
- gmp=6.2.1=h2531618_2
- gnutls=3.6.15=he1e5248_0
- gst-plugins-base=1.14.0=h8213a91_2
- gstreamer=1.14.0=h28cd5cc_2
- icu=58.2=he6710b0_3
- importlib-metadata=3.10.0=py38h06a4308_0
- importlib_metadata=3.10.0=hd3eb1b0_0
- intel-openmp=2021.2.0=h06a4308_610
- ipykernel=5.3.4=py38h5ca1d4c_0
- ipython=7.22.0=py38hb070fc8_0
- ipython_genutils=0.2.0=pyhd3eb1b0_1
- ipywidgets=7.6.3=pyhd3eb1b0_1
- jedi=0.17.0=py38_0
- jinja2=2.11.3=pyhd3eb1b0_0
- joblib=1.0.1=pyhd3eb1b0_0
- jpeg=9b=h024ee3a_2
- jsonschema=3.2.0=py_2
- jupyter=1.0.0=py38_7
- jupyter_client=6.1.12=pyhd3eb1b0_0
- jupyter_console=6.4.0=pyhd3eb1b0_0
- jupyter_core=4.7.1=py38h06a4308_0
- jupyterlab_pygments=0.1.2=py_0
- jupyterlab_widgets=1.0.0=pyhd3eb1b0_1
- kiwisolver=1.3.1=py38h2531618_0
- lame=3.100=h7b6447c_0
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.33.1=h53a641e_7
- libffi=3.3=he6710b0_2
- libgcc-ng=9.1.0=hdf63c60_0
- libgfortran-ng=7.3.0=hdf63c60_0
- libiconv=1.15=h63c8f33_5
- libidn2=2.3.0=h27cfd23_0
- libpng=1.6.37=hbc83047_0
- libsodium=1.0.18=h7b6447c_0
- libstdcxx-ng=9.1.0=hdf63c60_0
- libtasn1=4.16.0=h27cfd23_0
- libtiff=4.1.0=h2733197_1
- libunistring=0.9.10=h27cfd23_0
- libuuid=1.0.3=h1bed415_2
- libuv=1.40.0=h7b6447c_0
- libxcb=1.14=h7b6447c_0
- libxml2=2.9.10=hb55368b_3
- lz4-c=1.9.3=h2531618_0
- markupsafe=1.1.1=py38h7b6447c_0
- matplotlib-base=3.3.4=py38h62a2d02_0
- mistune=0.8.4=py38h7b6447c_1000
- mkl=2021.2.0=h06a4308_296
- mkl-service=2.3.0=py38h27cfd23_1
- mkl_fft=1.3.0=py38h42c9631_2
- mkl_random=1.2.1=py38ha9443f7_2
- nbclient=0.5.3=pyhd3eb1b0_0
- nbconvert=6.0.7=py38_0
- nbformat=5.1.3=pyhd3eb1b0_0
- ncurses=6.2=he6710b0_1
- nest-asyncio=1.5.1=pyhd3eb1b0_0
- nettle=3.7.2=hbbd107a_1
- ninja=1.10.2=hff7bd54_1
- notebook=6.3.0=py38h06a4308_0
- numpy-base=1.20.1=py38h7d8b39e_0
- olefile=0.46=py_0
- openh264=2.1.0=hd408876_0
- openssl=1.1.1k=h27cfd23_0
- packaging=20.9=pyhd3eb1b0_0
- pandas=1.2.4=py38h2531618_0
- pandoc=2.12=h06a4308_0
- pandocfilters=1.4.3=py38h06a4308_1
- parso=0.8.2=pyhd3eb1b0_0
- pcre=8.44=he6710b0_0
- pexpect=4.8.0=pyhd3eb1b0_3
- pickleshare=0.7.5=pyhd3eb1b0_1003
- pillow=8.2.0=py38he98fc37_0
- pip=21.0.1=py38h06a4308_0
- prometheus_client=0.10.1=pyhd3eb1b0_0
- prompt-toolkit=3.0.17=pyh06a4308_0
- prompt_toolkit=3.0.17=hd3eb1b0_0
- ptyprocess=0.7.0=pyhd3eb1b0_2
- pycparser=2.20=py_2
- pygments=2.8.1=pyhd3eb1b0_0
- pyparsing=2.4.7=pyhd3eb1b0_0
- pyqt=5.9.2=py38h05f1152_4
- pyrsistent=0.17.3=py38h7b6447c_0
- python=3.8.8=hdb3f193_5
- python-dateutil=2.8.1=pyhd3eb1b0_0
- pytorch=1.8.1=py3.8_cuda10.2_cudnn7.6.5_0
- pytz=2021.1=pyhd3eb1b0_0
- pyzmq=20.0.0=py38h2531618_1
- qt=5.9.7=h5867ecd_1
- qtconsole=5.0.3=pyhd3eb1b0_0
- qtpy=1.9.0=py_0
- readline=8.1=h27cfd23_0
- scikit-learn=0.24.1=py38ha9443f7_0
- seaborn=0.11.1=pyhd3eb1b0_0
- send2trash=1.5.0=pyhd3eb1b0_1
- setuptools=52.0.0=py38h06a4308_0
- sip=4.19.13=py38he6710b0_0
- six=1.15.0=py38h06a4308_0
- sqlite=3.35.4=hdfb4753_0
- terminado=0.9.4=py38h06a4308_0
- testpath=0.4.4=pyhd3eb1b0_0
- threadpoolctl=2.1.0=pyh5ca1d4c_0
- tk=8.6.10=hbc83047_0
- torchaudio=0.8.1=py38
- torchvision=0.9.1=py38_cu102
- tornado=6.1=py38h27cfd23_0
- traitlets=5.0.5=pyhd3eb1b0_0
- typing_extensions=3.7.4.3=pyha847dfd_0
- wcwidth=0.2.5=py_0
- webencodings=0.5.1=py38_1
- wheel=0.36.2=pyhd3eb1b0_0
- widgetsnbextension=3.5.1=py38_0
- xz=5.2.5=h7b6447c_0
- zeromq=4.3.4=h2531618_0
- zipp=3.4.1=pyhd3eb1b0_0
- zlib=1.2.11=h7b6447c_3
- zstd=1.4.9=haebb681_0
- pip:
- matplotlib==3.4.1
- numpy==1.20.2
- scipy==1.6.3
- sklearn==0.0
- torch==1.8.1
prefix: /home/cuong/anaconda3/envs/GenotypeImputationGRU