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Why I can not convert amino acid using pymol? #305
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Any suggestions? |
Before cmd.get_wizard().do_select("res") |
You could also use psico.modelling.mutate_all. psico.modelling.mutate_all(f"{base_name} and resn ASN+GLN", "LEU") |
I find pymol might turn ASP into VAL or ALA using this code, but I set as ASP→LEU, why? |
Thanks for your constructive suggestions, and I have a little detailed question about mutation process of pymol to ask you.
HOW DOES IT AVOID SPACIAL STRUCTURE CLASHES?
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I also find a few residues did not convert as I want, and do not know why. |
Dear developer, I want to mutate all GLN&ASN to LEU of protein files to do some further research, but EVEN THOUGH the python scripts runs well without error, the output file still have all the GLN&ASN left.
AND the command terminal code output is like:
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