You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
When I annotated the genome with N annotators and then discover that I need one more annotator I have to run a separate job with N+1 annotators.
Based on my and my teammate's experience it is a head-ache. Maybe you can add an option to add compute with new annotators without reannotating with annotators that were already used before? It can save users a lot of time.
The text was updated successfully, but these errors were encountered:
antonkulaga
changed the title
feature request: adding
feature request: adding new annotator to already annotated vcf
Aug 7, 2022
@antonkulaga With the current latest version of OakVar, the following is possible.
ov run input.vcf -a clinvar
This will generate input.vcf.sqlite.
ov run input.vcf.sqlite -a biogrid
This will add biogrid annotation to input.vcf.sqlite.
ov run input.vcf.sqlite -a cosmic -t vcf
This will add cosmic annotation to input.vcf.sqlite and generate input.vcf.vcf with the clinvar, biogrid, and cosmic annotation.
When I annotated the genome with N annotators and then discover that I need one more annotator I have to run a separate job with N+1 annotators.
Based on my and my teammate's experience it is a head-ache. Maybe you can add an option to add compute with new annotators without reannotating with annotators that were already used before? It can save users a lot of time.
The text was updated successfully, but these errors were encountered: