From 2e0ead422d25057f95925665e357533e6cc749c2 Mon Sep 17 00:00:00 2001 From: q2d2 Date: Sun, 29 Sep 2024 00:37:07 +0000 Subject: [PATCH 1/2] Automated updates to seed environment: tiny --- 2024.10/tiny/passed/seed-environment-conda.yml | 1 + 1 file changed, 1 insertion(+) diff --git a/2024.10/tiny/passed/seed-environment-conda.yml b/2024.10/tiny/passed/seed-environment-conda.yml index 59b37abe..c79cefe1 100644 --- a/2024.10/tiny/passed/seed-environment-conda.yml +++ b/2024.10/tiny/passed/seed-environment-conda.yml @@ -27,3 +27,4 @@ dependencies: extras: variant_override: qiime2_epoch: '2024.10' +# modified: 2024-09-29 From c20dad6c2be27439d0b38816130ca4bd05e2283b Mon Sep 17 00:00:00 2001 From: q2d2 Date: Sun, 29 Sep 2024 01:38:05 +0000 Subject: [PATCH 2/2] Update conda environments (Prepare-2024.10/tiny/2024-09-29) --- .../tiny/passed/qiime2-tiny-macos-latest-conda.yml | 8 ++++---- .../tiny/passed/qiime2-tiny-ubuntu-latest-conda.yml | 13 ++++++------- 2024.10/tiny/passed/seed-environment-conda.yml | 1 - 3 files changed, 10 insertions(+), 12 deletions(-) diff --git a/2024.10/tiny/passed/qiime2-tiny-macos-latest-conda.yml b/2024.10/tiny/passed/qiime2-tiny-macos-latest-conda.yml index 7b1d8667..2f773a9f 100644 --- a/2024.10/tiny/passed/qiime2-tiny-macos-latest-conda.yml +++ b/2024.10/tiny/passed/qiime2-tiny-macos-latest-conda.yml @@ -46,7 +46,7 @@ dependencies: - conda-pack=0.7.0 - cryptography=43.0.1 - curl=8.8.0 -- debugpy=1.8.5 +- debugpy=1.8.6 - decorator=4.4.2 - defusedxml=0.7.1 - dill=0.3.8 @@ -182,7 +182,7 @@ dependencies: - platformdirs=4.3.6 - pluggy=1.5.0 - prometheus_client=0.21.0 -- prompt-toolkit=3.0.47 +- prompt-toolkit=3.0.48 - psutil=6.0.0 - ptyprocess=0.7.0 - pure_eval=0.2.3 @@ -200,7 +200,7 @@ dependencies: - python-dateutil=2.9.0 - python-fastjsonschema=2.20.0 - python-json-logger=2.0.7 -- python-tzdata=2024.1 +- python-tzdata=2024.2 - python_abi=3.10 - pytz=2024.2 - pyyaml=6.0.2 @@ -236,7 +236,7 @@ dependencies: - scipy=1.13.0 - send2trash=1.8.3 - setproctitle=1.3.3 -- setuptools=74.1.2 +- setuptools=75.1.0 - sigtool=0.1.3 - six=1.16.0 - sniffio=1.3.1 diff --git a/2024.10/tiny/passed/qiime2-tiny-ubuntu-latest-conda.yml b/2024.10/tiny/passed/qiime2-tiny-ubuntu-latest-conda.yml index 8ee64234..3826b922 100644 --- a/2024.10/tiny/passed/qiime2-tiny-ubuntu-latest-conda.yml +++ b/2024.10/tiny/passed/qiime2-tiny-ubuntu-latest-conda.yml @@ -7,7 +7,6 @@ dependencies: - _libgcc_mutex=0.1 - _openmp_mutex=4.5 - _r-mutex=1.0.1 -- _sysroot_linux-64_curr_repodata_hack=3 - anyio=4.6.0 - appdirs=1.4.4 - argon2-cffi=23.1.0 @@ -19,7 +18,7 @@ dependencies: - bcrypt=4.2.0 - beautifulsoup4=4.12.3 - bibtexparser=1.4.1 -- binutils_impl_linux-64=2.40 +- binutils_impl_linux-64=2.43 - biom-format=2.1.15 - bleach=6.1.0 - brotli-python=1.1.0 @@ -39,7 +38,7 @@ dependencies: - conda-pack=0.7.0 - cryptography=43.0.1 - curl=8.8.0 -- debugpy=1.8.5 +- debugpy=1.8.6 - decorator=4.4.2 - defusedxml=0.7.1 - dill=0.3.8 @@ -99,7 +98,7 @@ dependencies: - kernel-headers_linux-64=3.10.0 - keyutils=1.6.1 - krb5=1.21.3 -- ld_impl_linux-64=2.40 +- ld_impl_linux-64=2.43 - lerc=4.0.0 - libaec=1.1.3 - libblas=3.9.0 @@ -178,7 +177,7 @@ dependencies: - platformdirs=4.3.6 - pluggy=1.5.0 - prometheus_client=0.21.0 -- prompt-toolkit=3.0.47 +- prompt-toolkit=3.0.48 - psutil=6.0.0 - pthread-stubs=0.4 - ptyprocess=0.7.0 @@ -195,7 +194,7 @@ dependencies: - python-dateutil=2.9.0 - python-fastjsonschema=2.20.0 - python-json-logger=2.0.7 -- python-tzdata=2024.1 +- python-tzdata=2024.2 - python_abi=3.10 - pytz=2024.2 - pyyaml=6.0.2 @@ -232,7 +231,7 @@ dependencies: - sed=4.8 - send2trash=1.8.3 - setproctitle=1.3.3 -- setuptools=74.1.2 +- setuptools=75.1.0 - six=1.16.0 - sniffio=1.3.1 - soupsieve=2.5 diff --git a/2024.10/tiny/passed/seed-environment-conda.yml b/2024.10/tiny/passed/seed-environment-conda.yml index c79cefe1..59b37abe 100644 --- a/2024.10/tiny/passed/seed-environment-conda.yml +++ b/2024.10/tiny/passed/seed-environment-conda.yml @@ -27,4 +27,3 @@ dependencies: extras: variant_override: qiime2_epoch: '2024.10' -# modified: 2024-09-29