-
Notifications
You must be signed in to change notification settings - Fork 0
/
DESCRIPTION
30 lines (30 loc) · 927 Bytes
/
DESCRIPTION
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
Package: luandre
Type: Package
Title: Enrichment analysis of differential gene expression data
Version: 1.0
Author: André Bourbonnais, Luan Gardenalli
Maintainer: André Bourbonnais <andbou95@gmail.com>
Description: Package with enrichment analysis tools for bulk RNA-seq data.
With quality processed RNA-seq data, one can use LuAndre to filter
biological unrelevant gene counts and conduct an differential analysis by
fitting a general linear model. Either with a wrapper or step-wise workflow.
In the end, a summarised excel file and multiple enrichment plots will be
stored in your working directory.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Suggests:
testthat (>= 3.0.0)
Config/testthat/edition: 3
Imports:
edgeR,
limma,
clusterProfiler,
org.Hs.eg.db,
ggplot2,
enrichplot,
GOSemSim,
ggupset,
openxlsx,
AnnotationDbi