From 57f6ae265661fd0740df43efa9544d7ab0714dcd Mon Sep 17 00:00:00 2001 From: Jonas Hellgoth Date: Wed, 7 Feb 2024 12:24:19 +0100 Subject: [PATCH] do not warn if saource is already in s3 format (#129) --- mobie/metadata/remote_metadata.py | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/mobie/metadata/remote_metadata.py b/mobie/metadata/remote_metadata.py index 613dbfb..7c7407d 100644 --- a/mobie/metadata/remote_metadata.py +++ b/mobie/metadata/remote_metadata.py @@ -94,7 +94,9 @@ def add_remote_source_metadata(metadata, dataset_folder, dataset_name, return new_metadata for file_format, storage in image_data.items(): - if file_format == "bdv.n5": + if file_format in ["bdv.n5.s3", "ome.zarr.s3", "openOrganelle.s3"]: + pass + elif file_format == "bdv.n5": new_format, s3_storage = _to_bdv_s3(file_format, dataset_folder, dataset_name, storage, service_endpoint, bucket_name, region) new_metadata[source_type]["imageData"][new_format] = s3_storage