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output of phy #75

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mozdas opened this issue Feb 23, 2019 · 1 comment
Open

output of phy #75

mozdas opened this issue Feb 23, 2019 · 1 comment

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@mozdas
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mozdas commented Feb 23, 2019

Hi Guys,
Since klustaviewa is not working for me anymore, I switched to phy. You normally get kwik file to Klustvieawa, then do manual spike sorting, then your output is saved to a clue file in the same directory. But For phy I don't see a clue file or even a cvs file.
It would be greatly appreciated if you could help urgently. Thank you :)

I copied part of phy.log
I am not sure if this is the problem?
/home/ozdas/Downloads/.phy/hybrid_10sec/main/0/new_cluster_id.json doesn't exist.

2019-02-23 17:48:55 [D] model:671 Enable waveform filter.
2019-02-23 17:48:55 [D] model:467 Loading traces: hybrid_10sec.dat
2019-02-23 17:48:55 [D] model:1067 Kwik file /home/ozdas/Downloads/hybrid_10sec.kwik loaded.
2019-02-23 17:48:55 [D] context:35 Create cache directory /home/ozdas/Downloads/.phy/hybrid_10sec/main/0.
2019-02-23 17:48:55 [D] context:56 Initialize joblib cache dir at /home/ozdas/Downloads/.phy/hybrid_10sec/main/0.
2019-02-23 17:48:55 [D] context:128 The file /home/ozdas/Downloads/.phy/hybrid_10sec/main/0/new_cluster_id.json doesn't exist.
2019-02-23 17:48:55 [D] config:46 Load config file /home/ozdas/.phy/phy_config.py.
2019-02-23 17:48:55 [D] gui:428 Load the GUI state from /home/ozdas/.phy/KwikGUI/state.json.
2019-02-23 17:48:55 [D] utils:51 Get box size for 32 points.
2019-02-23 17:48:56 [D] gui:171 Load the geometry state.
2019-02-23 17:49:00 [D] gui_component:393 Select clusters: 6.
2019-02-23 17:49:01 [D] gui_component:393 Select clusters: 4.
2019-02-23 17:49:05 [D] gui_component:393 Select clusters: 4.
2019-02-23 17:49:07 [I] gui_component:219 Change metadata_group for clusters 4 to good.
2019-02-23 17:49:07 [D] gui_component:462 Get next_cluster for 4: None.
2019-02-23 17:49:07 [D] gui_component:393 Select clusters: 6.

@mozdas
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mozdas commented Feb 23, 2019

And this is the error I get when I run
QGtkStyle could not resolve GTK. Make sure you have installed the proper libraries.

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