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[BUG]: Cannot get the bot to run with either --resume or YAML mode #666

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rosenfj1 opened this issue Oct 29, 2024 · 1 comment
Open

[BUG]: Cannot get the bot to run with either --resume or YAML mode #666

rosenfj1 opened this issue Oct 29, 2024 · 1 comment
Labels
bug Something isn't working

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@rosenfj1
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Describe the bug

Neither mode works and there is no clear idea how to fix the YAML

Steps to reproduce

plain_text_resume.yaml:
personal_information:
name: Jeffrey
surname: Rosenfeld
date_of_birth: 10/06/1979
country: United States
city: Bergenfield
address: 69 Wilbur Road
zip_code: '07621'
phone_prefix: jeffrey.rosenfeld@gmail.com
phone: 917-664-8374
email: jeffrey.rosenfeld@gmail.com
linkedin: 'https://www.linkedin.com/in/jeffrosenfeld/'
education_details:

  • education_level: MBA
    institution: Rutgers University
    field_of_study: Business
    start_date: "2021"
    year_of_completion: "2024"
  • education_level: Doctoral Degree
    institution: NYU
    field_of_study: Biology
    start_date: "2005"
    year_of_completion: "2009'

experience_details:

  • position: 'Executive Director, Genomics and Bioinformatics'
    company: Tonix Pharmaceuticals
    employment_period: 2022-2024
    location: 'Chatham, NJ'
    industry: Pharmaceuticals
    key_responsibilities:
    • responsibility: "Managed team of Researchers and Consultants to perform Genome and Exome sequencing for clinical trials"
    • responsibility: "Planned, executed, and scaled research strategy"
    • responsibility_3personal_information:
      name: Jeffrey
      surname: Rosenfeld
      date_of_birth: 10/06/1979
      country: United States
      city: Bergenfield
      address: 69 Wilbur Road
      zip_code: '07621'
      phone_prefix: jeffrey.rosenfeld@gmail.com
      phone: 917-664-8374
      email: jeffrey.rosenfeld@gmail.com
      linkedin: 'https://www.linkedin.com/in/jeffrosenfeld/'
      education_details:
  • education_level: MBA
    institution: Rutgers University
    field_of_study: Business
    start_date: "2021"
    year_of_completion: "2024"
  • education_level: Doctoral Degree
    institution: NYU
    field_of_study: Biology
    start_date: "2005"
    year_of_completion: "2009'

experience_details:

  • position: 'Executive Director, Genomics and Bioinformatics'
    company: Tonix Pharmaceuticals
    employment_period: 2022-2024
    location: 'Chatham, NJ'
    industry: Pharmaceuticals
    key_responsibilities:

    • responsibility: "Managed team of Researchers and Consultants to perform Genome and Exome sequencing for clinical trials"
    • responsibility: "Planned, executed, and scaled research strategy"
    • responsibility: "Developed and implemented novel multi-marker GWAS algorithms for genome enhanced clinical trials"
    • responsibility: "Administered the Identification of genomic markers that predispose patients for fibromyalgia"
    • responsibility: "Oversaw the identification of 20 SNP pharmacogenomics panel to identify patients that will respond to therapy"
    • responsibility: "Presented results weekly to the CEO and CMO"
    • responsibility: "Sourced, selected, and managed vendors, consultants and Contract Research Organizations"

  • position: Associate Professor of Pathology – Precision Medicine
    company: Rutgers University - Cancer Institute of NJ
    employment_period: 2011-2022
    location: 'New Brunswick, NJ'
    industry: Laboratory Testing
    key_responsibilities:

    • responsibility_1: "Supervised a team of Researchers enabling genomics, cheminformatics and digital pathology"
    • responsibility_2: "Served as Bioinformatics Lead on implementation of 3 CLIA/CAP certified solid tumor and myeloid panels"
    • responsibility_3: "Handled all aspects of sequencing projects from experimental design through analysis, and publication"
    • responsibility_4: "Developed a Machine Learning model to predict the source organ of tumors of unknown origin"
    • responsibility_5: "Awarded $100k TechAdvance grant for single-ce'll sperm sequencing of families with autistic children"
    • responsibility_6: "Co-investigator or consultant on over $2M worth of grants from NIH and the Department of Defense"
    • responsibility_7: Managed Cancer Precision Medicine data from Foundation Medicine"

  • position: President
    company: Rosenfeld Consulting
    employment_period: 2013-present
    location: New Jersey
    industry: Consulting
    key_responsibilities:

    • responsibility_1: "Comapred the Economics of ambient storage and the use of freezers for nucleic acid storage"
    • responsibility_2: "Advised executive leadership by participating in hundreds of phone calls, providing insights on bioinformatics,genomics, lab testing, and precision medicine as well-regarded expert and KOL"
    • responsibility_3: "Provided technical due diligence and advised on $70M investment in MissionBio, among other investment"
    • responsibility_4: "Expert witness for the BRCA1 patent litigation, providing insights into genomic aspects of the litigation"

  • position: Research Scientist
    company: Northwell Health
    employment_period: 2009-2011
    location: 'Queens, NY'
    industry: Basic Research
    key_responsibilities:

    • responsibility_1: "Conducted analysis of GWAS and exome sequencing data for schizophrenia"
    • responsibility_2: "Designed and integrated a framework to identify multi-nucleotide polymorphisms in genomes
    • responsibility_3: Recipient of NARSAD Young Investigator Grant
      languages:

  • language: English
    proficiency: Native

availability:
notice_period: 2 weeks
self_identification:
gender: '[Gender]'
pronouns: '[Pronouns]'
veteran: '[No]'
disability: '[No]'
ethnicity: '[Caucasian]'
legal_authorization:
eu_work_authorization: '[No]'
us_work_authorization: '[Yes]'
requires_us_visa: '[No]'
requires_us_sponsorship: '[Yes]'
requires_eu_visa: '[Yes]'
legally_allowed_to_work_in_eu: '[No]'
legally_allowed_to_work_in_us: '[Yes]'
requires_eu_sponsorship: '[Yes]'
canada_work_authorization: '[No]'
requires_canada_visa: '[No]'
legally_allowed_to_work_in_canada: '[No]'
requires_canada_sponsorship: '[Yes]'
uk_work_authorization: '[No]'
requires_uk_visa: '[Yes]'
legally_allowed_to_work_in_uk: '[No]'
requires_uk_sponsorship: '[Yes]'
work_preferences:
remote_work: '[Yes]'
in_person_work: '[Yes]'
open_to_relocation: '[Yes]'
willing_to_complete_assessments: '[Yes]'
willing_to_undergo_drug_tests: '[Yes]'
willing_to_undergo_background_checks: '[Yes]'
personal_information:
name: Jeffrey
surname: Rosenfeld
date_of_birth: 10/06/1979
country: United States
city: Bergenfield
address: 69 Wilbur Road
zip_code: '07621'
phone_prefix: jeffrey.rosenfeld@gmail.com
phone: 917-664-8374
email: jeffrey.rosenfeld@gmail.com
linkedin: 'https://www.linkedin.com/in/jeffrosenfeld/'
education_details:

  • education_level: MBA
    institution: Rutgers University
    field_of_study: Business
    start_date: "2021"
    year_of_completion: "2024"
  • education_level: Doctoral Degree
    institution: NYU
    field_of_study: Biology
    start_date: "2005"
    year_of_completion: "2009'

experience_details:

  • position: 'Executive Director, Genomics and Bioinformatics'
    company: Tonix Pharmaceuticals
    employment_period: 2022-2024
    location: 'Chatham, NJ'
    industry: Pharmaceuticals
    key_responsibilities:

    • responsibility: "Managed team of Researchers and Consultants to perform Genome and Exome sequencing for clinical trials"
    • responsibility: "Planned, executed, and scaled research strategy"
    • responsibility: "Developed and implemented novel multi-marker GWAS algorithms for genome enhanced clinical trials"
    • responsibility: "Administered the Identification of genomic markers that predispose patients for fibromyalgia"
    • responsibility: "Oversaw the identification of 20 SNP pharmacogenomics panel to identify patients that will respond to therapy"
    • responsibility: "Presented results weekly to the CEO and CMO"
    • responsibility: "Sourced, selected, and managed vendors, consultants and Contract Research Organizations"

  • position: Associate Professor of Pathology – Precision Medicine
    company: Rutgers University - Cancer Institute of NJ
    employment_period: 2011-2022
    location: 'New Brunswick, NJ'
    industry: Laboratory Testing
    key_responsibilities:

    • responsibility_1: "Supervised a team of Researchers enabling genomics, cheminformatics and digital pathology"
    • responsibility_2: "Served as Bioinformatics Lead on implementation of 3 CLIA/CAP certified solid tumor and myeloid panels"
    • responsibility_3: "Handled all aspects of sequencing projects from experimental design through analysis, and publication"
    • responsibility_4: "Developed a Machine Learning model to predict the source organ of tumors of unknown origin"
    • responsibility_5: "Awarded $100k TechAdvance grant for single-ce'll sperm sequencing of families with autistic children"
    • responsibility_6: "Co-investigator or consultant on over $2M worth of grants from NIH and the Department of Defense"
    • responsibility_7: Managed Cancer Precision Medicine data from Foundation Medicine"

  • position: President
    company: Rosenfeld Consulting
    employment_period: 2013-present
    location: New Jersey
    industry: Consulting
    key_responsibilities:

    • responsibility_1: "Comapred the Economics of ambient storage and the use of freezers for nucleic acid storage"
    • responsibility_2: "Advised executive leadership by participating in hundreds of phone calls, providing insights on bioinformatics,genomics, lab testing, and precision medicine as well-regarded expert and KOL"
    • responsibility_3: "Provided technical due diligence and advised on $70M investment in MissionBio, among other investment"
    • responsibility_4: "Expert witness for the BRCA1 patent litigation, providing insights into genomic aspects of the litigation"

  • position: Research Scientist
    company: Northwell Health
    employment_period: 2009-2011
    location: 'Queens, NY'
    industry: Basic Research
    key_responsibilities:

    • responsibility_1: "Conducted analysis of GWAS and exome sequencing data for schizophrenia"
    • responsibility_2: "Designed and integrated a framework to identify multi-nucleotide polymorphisms in genomes
    • responsibility_3: Recipient of NARSAD Young Investigator Grant
      languages:

  • language: English
    proficiency: Native

availability:
notice_period: 2 weeks
self_identification:
gender: '[Gender]'
pronouns: '[Pronouns]'
veteran: '[No]'
disability: '[No]'
ethnicity: '[Caucasian]'
legal_authorization:
eu_work_authorization: '[No]'
us_work_authorization: '[Yes]'
requires_us_visa: '[No]'
requires_us_sponsorship: '[Yes]'
requires_eu_visa: '[Yes]'
legally_allowed_to_work_in_eu: '[No]'
legally_allowed_to_work_in_us: '[Yes]'
requires_eu_sponsorship: '[Yes]'
canada_work_authorization: '[No]'
requires_canada_visa: '[No]'
legally_allowed_to_work_in_canada: '[No]'
requires_canada_sponsorship: '[Yes]'
uk_work_authorization: '[No]'
requires_uk_visa: '[Yes]'
legally_allowed_to_work_in_uk: '[No]'
requires_uk_sponsorship: '[Yes]'
work_preferences:
remote_work: '[Yes]'
in_person_work: '[Yes]'
open_to_relocation: '[Yes]'
willing_to_complete_assessments: '[Yes]'
willing_to_undergo_drug_tests: '[Yes]'
willing_to_undergo_background_checks: '[Yes]'
personal_information:
name: Jeffrey
surname: Rosenfeld
date_of_birth: 10/06/1979
country: United States
city: Bergenfield
address: 69 Wilbur Road
zip_code: '07621'
phone_prefix: jeffrey.rosenfeld@gmail.com
phone: 917-664-8374
email: jeffrey.rosenfeld@gmail.com
linkedin: 'https://www.linkedin.com/in/jeffrosenfeld/'
education_details:

  • education_level: MBA
    institution: Rutgers University
    field_of_study: Business
    start_date: "2021"
    year_of_completion: "2024"
  • education_level: Doctoral Degree
    institution: NYU
    field_of_study: Biology
    start_date: "2005"
    year_of_completion: "2009'

experience_details:

  • position: 'Executive Director, Genomics and Bioinformatics'
    company: Tonix Pharmaceuticals
    employment_period: 2022-2024
    location: 'Chatham, NJ'
    industry: Pharmaceuticals
    key_responsibilities:

    • responsibility: "Managed team of Researchers and Consultants to perform Genome and Exome sequencing for clinical trials"
    • responsibility: "Planned, executed, and scaled research strategy"
    • responsibility: "Developed and implemented novel multi-marker GWAS algorithms for genome enhanced clinical trials"
    • responsibility: "Administered the Identification of genomic markers that predispose patients for fibromyalgia"
    • responsibility: "Oversaw the identification of 20 SNP pharmacogenomics panel to identify patients that will respond to therapy"
    • responsibility: "Presented results weekly to the CEO and CMO"
    • responsibility: "Sourced, selected, and managed vendors, consultants and Contract Research Organizations"

  • position: Associate Professor of Pathology – Precision Medicine
    company: Rutgers University - Cancer Institute of NJ
    employment_period: 2011-2022
    location: 'New Brunswick, NJ'
    industry: Laboratory Testing
    key_responsibilities:

    • responsibility_1: "Supervised a team of Researchers enabling genomics, cheminformatics and digital pathology"
    • responsibility_2: "Served as Bioinformatics Lead on implementation of 3 CLIA/CAP certified solid tumor and myeloid panels"
    • responsibility_3: "Handled all aspects of sequencing projects from experimental design through analysis, and publication"
    • responsibility_4: "Developed a Machine Learning model to predict the source organ of tumors of unknown origin"
    • responsibility_5: "Awarded $100k TechAdvance grant for single-ce'll sperm sequencing of families with autistic children"
    • responsibility_6: "Co-investigator or consultant on over $2M worth of grants from NIH and the Department of Defense"
    • responsibility_7: Managed Cancer Precision Medicine data from Foundation Medicine"

  • position: President
    company: Rosenfeld Consulting
    employment_period: 2013-present
    location: New Jersey
    industry: Consulting
    key_responsibilities:

    • responsibility_1: "Comapred the Economics of ambient storage and the use of freezers for nucleic acid storage"
    • responsibility_2: "Advised executive leadership by participating in hundreds of phone calls, providing insights on bioinformatics,genomics, lab testing, and precision medicine as well-regarded expert and KOL"
    • responsibility_3: "Provided technical due diligence and advised on $70M investment in MissionBio, among other investment"
    • responsibility_4: "Expert witness for the BRCA1 patent litigation, providing insights into genomic aspects of the litigation"

  • position: Research Scientist
    company: Northwell Health
    employment_period: 2009-2011
    location: 'Queens, NY'
    industry: Basic Research
    key_responsibilities:

    • responsibility_1: "Conducted analysis of GWAS and exome sequencing data for schizophrenia"
    • responsibility_2: "Designed and integrated a framework to identify multi-nucleotide polymorphisms in genomes
    • responsibility_3: Recipient of NARSAD Young Investigator Grant
      languages:

  • language: English
    proficiency: Native

availability:
notice_period: 2 weeks
self_identification:
gender: '[Gender]'
pronouns: '[Pronouns]'
veteran: '[No]'
disability: '[No]'
ethnicity: '[Caucasian]'
legal_authorization:
eu_work_authorization: '[No]'
us_work_authorization: '[Yes]'
requires_us_visa: '[No]'
requires_us_sponsorship: '[Yes]'
requires_eu_visa: '[Yes]'
legally_allowed_to_work_in_eu: '[No]'
legally_allowed_to_work_in_us: '[Yes]'
requires_eu_sponsorship: '[Yes]'
canada_work_authorization: '[No]'
requires_canada_visa: '[No]'
legally_allowed_to_work_in_canada: '[No]'
requires_canada_sponsorship: '[Yes]'
uk_work_authorization: '[No]'
requires_uk_visa: '[Yes]'
legally_allowed_to_work_in_uk: '[No]'
requires_uk_sponsorship: '[Yes]'
work_preferences:
remote_work: '[Yes]'
in_person_work: '[Yes]'
open_to_relocation: '[Yes]'
willing_to_complete_assessments: '[Yes]'
willing_to_undergo_drug_tests: '[Yes]'
willing_to_undergo_background_checks: '[Yes]'
: "Developed and implemented novel multi-marker GWAS algorithms for genome enhanced clinical trials"
- responsibility_4: "Administered the Identification of genomic markers that predispose patients for fibromyalgia"
- responsibility_5: "Oversaw the identification of 20 SNP pharmacogenomics panel to identify patients that will respond to therapy"
- responsibility_6: "Presented results weekly to the CEO and CMO"
- responsibility_7: "Sourced, selected, and managed vendors, consultants and Contract Research Organizations"

  • position: Associate Professor of Pathology – Precision Medicine
    company: Rutgers University - Cancer Institute of NJ
    employment_period: 2011-2022
    location: 'New Brunswick, NJ'
    industry: Laboratory Testing
    key_responsibilities:
    • responsibility_1: "Supervised a team of Researchers enabling genomics, cheminformatics and digital pathology"
    • responsibility_2: "Served as Bioinformatics Lead on implementation of 3 CLIA/CAP certified solid tumor and myeloid panels"
    • responsibility_3: "Handled all aspects of sequencing projects from experimental design through analysis, and publication"
    • responsibility_4: "Developed a Machine Learning model to predict the source organ of tumors of unknown origin"
    • responsibility_5: "Awarded $100k TechAdvance grant for single-ce'll sperm sequencing of families with autistic children"
    • responsibility_6: "Co-investigator or consultant on over $2M worth of grants from NIH and the Department of Defense"
    • responsibility_7: Managed Cancer Precision Medicine data from Foundation Medicine"
  • position: President
    company: Rosenfeld Consulting
    employment_period: 2013-present
    location: New Jersey
    industry: Consulting
    key_responsibilities:
    • responsibility_1: "Comapred the Economics of ambient storage and the use of freezers for nucleic acid storage"
    • responsibility_2: "Advised executive leadership by participating in hundreds of phone calls, providing insights on bioinformatics,genomics, lab testing, and precision medicine as well-regarded expert and KOL"
    • responsibility_3: "Provided technical due diligence and advised on $70M investment in MissionBio, among other investment"
    • responsibility_4: "Expert witness for the BRCA1 patent litigation, providing insights into genomic aspects of the litigation"
  • position: Research Scientist
    company: Northwell Health
    employment_period: 2009-2011
    location: 'Queens, NY'
    industry: Basic Research
    key_responsibilities:
    • responsibility_1: "Conducted analysis of GWAS and exome sequencing data for schizophrenia"
    • responsibility_2: "Designed and integrated a framework to identify multi-nucleotide polymorphisms in genomes
    • responsibility_3: Recipient of NARSAD Young Investigator Grant
      languages:
  • language: English
    proficiency: Native

availability:
notice_period: 2 weeks
self_identification:
gender: '[Gender]'
pronouns: '[Pronouns]'
veteran: '[No]'
disability: '[No]'
ethnicity: '[Caucasian]'
legal_authorization:
eu_work_authorization: '[No]'
us_work_authorization: '[Yes]'
requires_us_visa: '[No]'
requires_us_sponsorship: '[Yes]'
requires_eu_visa: '[Yes]'
legally_allowed_to_work_in_eu: '[No]'
legally_allowed_to_work_in_us: '[Yes]'
requires_eu_sponsorship: '[Yes]'
canada_work_authorization: '[No]'
requires_canada_visa: '[No]'
legally_allowed_to_work_in_canada: '[No]'
requires_canada_sponsorship: '[Yes]'
uk_work_authorization: '[No]'
requires_uk_visa: '[Yes]'
legally_allowed_to_work_in_uk: '[No]'
requires_uk_sponsorship: '[Yes]'
work_preferences:
remote_work: '[Yes]'
in_person_work: '[Yes]'
open_to_relocation: '[Yes]'
willing_to_complete_assessments: '[Yes]'
willing_to_undergo_drug_tests: '[Yes]'
willing_to_undergo_background_checks: '[Yes]'

(virtual) jeffrey@Jeffreys-Laptop Auto_Jobs_Applier_AIHawk % python main.py
2024-10-29 13:29:07.563 | ERROR | main:main:219 - Runtime error: Error running the bot: Error parsing YAML file.

(virtual) jeffrey@Jeffreys-Laptop Auto_Jobs_Applier_AIHawk % python main.py --resume ~/Dropbox/test/Rosenfeld_Resume.pdf
2024-10-29 13:28:56.766 | ERROR | main:main:219 - Runtime error: Error running the bot: Error parsing YAML file.
plain_text_resume.yaml.txt

Expected behavior

The bot should run

Actual behavior

Bot crashed

Branch

None

Branch name

No response

Python version

No response

LLM Used

No response

Model used

No response

Additional context

No response
@rosenfj1 rosenfj1 added the bug Something isn't working label Oct 29, 2024
@FrancescoVassalli
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There is probably some issue with the formatting in the yaml file. You may be able to use a tool like this to find the issue

https://jsonformatter.org/yaml-formatter

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@FrancescoVassalli @rosenfj1