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################## BASE IMAGE #####################
FROM nfcore/base
################## METADATA ######################
LABEL base_image="nfcore/base"
LABEL version="1.0"
LABEL software="bam2cram"
LABEL software.version="1.0"
LABEL about.summary="Container image containing all requirements for save sam2cram conversion"
LABEL about.home="http://github.com/adigenova/bam2cram"
LABEL about.documentation="http://github.com/adigenova/bam2cram/README.md"
LABEL about.license_file="http://github.com/adigenova/bam2cram/LICENSE.txt"
LABEL about.license="GNU-3.0"
################## MAINTAINER ######################
MAINTAINER **digenovaa** <**digenovaa@fellows.iarc.fr**>
################## INSTALLATION ######################
COPY environment.yml /
RUN apt-get update && apt-get install -y procps && apt-get clean -y
RUN conda env create -n bam2cram -f /environment.yml && conda clean -a
ENV PATH /opt/conda/envs/bam2cram/bin:$PATH
RUN conda env export --name bam2cram > bam2cram-v1.0.yml