diff --git a/.github/workflows-source/ci-main.yml b/.github/workflows-source/ci-main.yml
index 5124ec1f161..49b9484d093 100644
--- a/.github/workflows-source/ci-main.yml
+++ b/.github/workflows-source/ci-main.yml
@@ -176,6 +176,9 @@ jobs:
         id: bazel-build-config-check
         uses: ./.github/actions/bazel-test-all/
         with:
+          # Diff logic is problematic for this CI job
+          # https://github.com/dfinity/ic/actions/runs/11528673458/job/32096105251
+          RUN_ON_DIFF_ONLY: false
           BAZEL_COMMAND: "build"
           BAZEL_TARGETS: "//rs/..."
           BAZEL_CI_CONFIG: "--config=check --config=ci --keep_going"
diff --git a/.github/workflows/ci-main.yml b/.github/workflows/ci-main.yml
index 4d27ddb1917..f2ba29ff44f 100644
--- a/.github/workflows/ci-main.yml
+++ b/.github/workflows/ci-main.yml
@@ -158,6 +158,9 @@ jobs:
         id: bazel-build-config-check
         uses: ./.github/actions/bazel-test-all/
         with:
+          # Diff logic is problematic for this CI job
+          # https://github.com/dfinity/ic/actions/runs/11528673458/job/32096105251
+          RUN_ON_DIFF_ONLY: false
           BAZEL_COMMAND: "build"
           BAZEL_TARGETS: "//rs/..."
           BAZEL_CI_CONFIG: "--config=check --config=ci --keep_going"