Issue Updating clusters_ContamPct.tsv: MIME Error the cause?

[ryanlash]

Hi all!

I am sorting with KS4 on a Cambridge H6 ASSY236 64-channel probe, and I'm able to manually curate just fine but for whatever reason when I'm done manually curating a cluster or I adjust the refactory period in the ACG view, the .tsv fails to update. I have been getting this MIME error, but not clear how this may be correlated to the issue with updating the .tsv. I have tried uninstalling and reinstalling via a new conda environment but did not seem to resolve. Any suggestions? Here is the debug output I get:

kilosort4>phy template-gui params.py --debug
17:05:37.039 [D] init:68 Start capturing exceptions.
17:05:37.400 [D] model:619 Loading spike clusters.
17:05:37.506 [W] model:625 Unreferenced clusters found in spike_clusters (generally not a problem)
17:05:37.563 [D] model:569 No channel shank file found.
17:05:37.564 [D] model:692 Loading templates.
17:05:37.605 [D] model:724 Templates are dense.
17:05:37.736 [W] model:667 Skipping spike waveforms that do not exist, they will be extracted on the fly from the raw data as needed.
17:05:37.740 [D] model:730 Loading the whitening matrix.
17:05:37.748 [D] model:737 Loading the inverse of the whitening matrix.
17:05:37.771 [D] model:766 Loading features.
17:05:37.797 [D] model:781 Features are sparse.
17:05:37.798 [D] model:803 Loading template features.
17:05:37.880 [D] model:530 Load spike_detection_templates.npy.
17:05:38.053 [D] model:530 Load spike_positions.npy.
17:05:38.055 [D] model:504 Load cluster_Amplitude.tsv.
17:05:38.069 [D] model:504 Load cluster_ContamPct.tsv.
17:05:38.094 [D] model:504 Load cluster_group.tsv.
17:05:38.114 [D] model:504 Load cluster_KSLabel.tsv.
17:05:38.593 [D] context:100 Initialize joblib cache dir at \kilosort4\.phy.
17:05:38.603 [D] context:101 Reducing the size of the cache if needed.
17:05:45.965 [D] base:102 Add filter high_pass.
17:05:45.971 [D] config:31 Load config file C:\Users\rylash\.phy\phy_config.py.
17:05:45.973 [D] plugin:146 Loading 0 plugins.
17:05:45.977 [D] context:126 Load memcache for phy.apps.base._get_mean_waveforms.
17:05:45.987 [D] context:126 Load memcache for phy.apps.base._get_mean_waveforms.
17:05:46.002 [D] context:126 Load memcache for phy.apps.base._get_template_waveforms.
17:05:46.012 [D] context:126 Load memcache for phy.apps.base.get_mean_spike_template_amplitudes.
17:05:46.023 [D] context:126 Load memcache for phy.apps.base.get_template_counts.
17:05:46.039 [D] context:126 Load memcache for phy.apps.base.get_template_for_cluster.
17:05:46.051 [D] context:126 Load memcache for phy.apps.template.gui.get_template_amplitude.
17:05:46.062 [D] context:126 Load memcache for phy.apps.base.get_cluster_amplitude.
17:05:46.072 [D] context:126 Load memcache for phy.apps.base.get_mean_firing_rate.
17:05:46.080 [D] context:126 Load memcache for phy.apps.base.get_best_channel.
17:05:46.091 [D] context:126 Load memcache for phy.apps.template.gui.get_best_channels.
17:05:46.164 [D] context:126 Load memcache for phy.apps.base.get_channel_shank.
17:05:46.177 [D] context:126 Load memcache for phy.apps.base.get_probe_depth.
17:05:46.187 [D] context:126 Load memcache for phy.apps.base.peak_channel_similarity.
17:05:46.372 [D] context:185 Save data to \kilosort4\.phy\spikes_per_cluster.pkl.
17:05:46.724 [D] gui:463 Creating GUI.
17:05:46.752 [D] state:46 Load C:\Users.phy\TemplateGUI\state.json for GUIState.
17:05:46.759 [D] state:46 Load \kilosort4.phy\state.json for GUIState.
17:05:47.221 [D] gui:718 Add view ClusterView to GUI.
17:05:47.231 [D] gui:718 Add view SimilarityView to GUI.
17:05:47.277 [D] gui:718 Add view WaveformView to GUI.
17:05:47.282 [D] base:337 Set state for WaveformView.
17:05:47.295 [D] gui:718 Add view CorrelogramView to GUI.
17:05:47.299 [D] base:337 Set state for CorrelogramView.
17:05:47.332 [D] gui:718 Add view ISIView to GUI.
17:05:47.336 [D] base:337 Set state for ISIView.
17:05:47.363 [D] gui:718 Add view FeatureView to GUI.
17:05:47.367 [D] base:337 Set state for FeatureView.
17:05:47.397 [D] gui:718 Add view AmplitudeView to GUI.
17:05:47.400 [D] base:337 Set state for AmplitudeView.
17:05:47.426 [D] gui:718 Add view FiringRateView to GUI.
17:05:47.430 [D] base:337 Set state for FiringRateView.
17:05:47.517 [D] gui:718 Add view TraceView to GUI.
17:05:47.520 [D] base:337 Set state for TraceView.
17:05:47.523 [D] base:494 Set color scheme to random.
17:05:47.634 [D] base:1626 Adding default color schemes to TraceView.
17:05:47.686 [D] gui:718 Add view ProbeView to GUI.
17:05:47.690 [D] base:337 Set state for ProbeView.
17:05:47.715 [D] gui:718 Add view ClusterScatterView to GUI.
17:05:47.720 [D] base:337 Set state for ClusterScatterView.
17:05:47.723 [D] base:494 Set color scheme to random.
17:05:47.726 [D] base:1626 Adding default color schemes to ClusterScatterView.
17:05:47.944 [D] gui:519 Load the geometry state.
QMimeDatabase: Error loading internal MIME data
An error has been encountered at line 1 of : Premature end of document.:
17:05:48.435 [D] supervisor:817 Clusters selected: [70] (39)
17:06:04.643 [D] interact:433 Lasso has 1 points.
17:06:05.516 [D] interact:433 Lasso has 2 points.
17:06:14.593 [D] interact:433 Lasso has 1 points.
17:06:17.494 [D] interact:433 Lasso has 2 points.
17:06:22.203 [D] interact:433 Lasso has 3 points.
17:06:26.908 [D] interact:433 Lasso has 4 points.
17:06:32.183 [D] interact:433 Lasso has 5 points.
17:06:35.228 [I] supervisor:702 Assigned 140329 spikes.

Any feedback is helpful, thank you!