diff --git a/MANIFEST.in b/MANIFEST.in
index d8fe221..aec00b5 100644
--- a/MANIFEST.in
+++ b/MANIFEST.in
@@ -37,6 +37,7 @@ include COPYING
 include external_dependencies.rst
 include requirements.rst
 include Dockerfile
+include Dockerfile_pq_all_tests
 
 # Include project documentation:
 recursive-include docs *.html
@@ -72,6 +73,7 @@ exclude .gitignore
 exclude .dir_bash_history
 exclude tests/.dir_bash_history
 exclude templates/.dir_bash_history
+exclude templates/.DS_Store
 exclude templates/project_template/.dir_bash_history
 exclude templates/project_template/docs/.dir_bash_history
 exclude templates/project_template/scripts/.dir_bash_history
diff --git a/README.rst b/README.rst
index b0cddf8..c4d7df0 100644
--- a/README.rst
+++ b/README.rst
@@ -299,7 +299,7 @@ v0.3 (future)
 - updated templates
 - added rsync example command and instructions for remote copies
 - added Ruffus/CGAT simplified pipeline template script
-
+- added example scripts and pipeline, option '--example'
 
 v0.2
 
@@ -447,6 +447,8 @@ For example, if you want to tag and version a previous commit, do the following:
 
 .. code-block:: bash
 
+    # Update version.py if needed
+
 	# Check the tag history:
 	git tag
 
@@ -459,6 +461,9 @@ For example, if you want to tag and version a previous commit, do the following:
 	# Push the tag 
 	# By default, the git push command does not transfer tags to remote servers, so run:
 	git push origin v0.1
+    
+    # You'll then need to click around in the GitHub repository to formally
+    publish the release.
 
 -----
 
diff --git a/project_quickstart/version.py b/project_quickstart/version.py
index 595b16e..d608463 100644
--- a/project_quickstart/version.py
+++ b/project_quickstart/version.py
@@ -1,3 +1,3 @@
 def set_version():
-    __version__ = '0.2.8'
+    __version__ = '0.2.9'
     return(__version__)