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Multiview reconstruction suddenly lacks Z (failed to reproduce fusion) #27

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SonaValuchova opened this issue Nov 3, 2019 · 1 comment

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@SonaValuchova
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Hi,
recently (9/24/2019) I have successfully fused one dataset of 5 angles (yay!). It was great. However, as I tried it again a some time later (10/31/2019), suddenly I failed to reproduce the fusion from the same data and I seem to have lost Z… Same happens to all my other datasets. I tried big stitcher with the same result.

after
before

I attached the bigdataviewer screenshot from former and latter .xml file. I tried to follow everything as before and also tried other settings but I keep failing to get it right.
Was there any update that might cause problems with Z after fusion when using .czi files without conversion to HDF5?

Thanks!
Sona

after.txt
before.txt

@StephanPreibisch
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Hi, this seems to be a problem of how you select the parameters for the registration. If it is still relevant, please upload a test dataset and we can have a look?

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