You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
SAM and everything opens and uploads Excel file just fine, AND did with MANY excel sheets that look exactly the same but have 3 that come up with this error when saving:
Warning: Error in <-: length of 'dimnames' [2] not equal to array extent
77: samr.compute.siggenes.table
76: reactive:getAllgenesTable [C:\Users\jessmk\AppData\Local\Temp\RtmpMVWhla\shinyapp7b801fa73be9\SAM-d998a4ed8cba4b7f071ec7f3b5b9606f4c192eed/server.R#472]
60: getAllgenesTable
47: observe [C:\Users\jessmk\AppData\Local\Temp\RtmpMVWhla\shinyapp7b801fa73be9\SAM-d998a4ed8cba4b7f071ec7f3b5b9606f4c192eed/server.R#916]
46:
3: runApp
2: runUrl
1: runGitHub
No difference in the files that worked versus those that give this error so unsure of how to go about fixing the issue, everything I have found via google does not work.
The text was updated successfully, but these errors were encountered:
I used to help with issues on that package, but I have no time yet.
The error at server.R#472 refers to a call to samr.compute.siggenes.table(samr.obj,delta, data, delta.table, min.foldchange = min.foldchange, compute.localfdr= input$localFDR, all.genes= TRUE), that is in fact the function really carrying out the calculation. There should be something wrong during the calculation with the data incriminated.
The best way to identify the problem is to get a reproducible example. If you could share 1 file with @MikeJSeo that would help him if he has time.
SAM and everything opens and uploads Excel file just fine, AND did with MANY excel sheets that look exactly the same but have 3 that come up with this error when saving:
Warning: Error in <-: length of 'dimnames' [2] not equal to array extent
77: samr.compute.siggenes.table
76: reactive:getAllgenesTable [C:\Users\jessmk\AppData\Local\Temp\RtmpMVWhla\shinyapp7b801fa73be9\SAM-d998a4ed8cba4b7f071ec7f3b5b9606f4c192eed/server.R#472]
60: getAllgenesTable
47: observe [C:\Users\jessmk\AppData\Local\Temp\RtmpMVWhla\shinyapp7b801fa73be9\SAM-d998a4ed8cba4b7f071ec7f3b5b9606f4c192eed/server.R#916]
46:
3: runApp
2: runUrl
1: runGitHub
No difference in the files that worked versus those that give this error so unsure of how to go about fixing the issue, everything I have found via google does not work.
The text was updated successfully, but these errors were encountered: