diff --git a/index.html b/index.html new file mode 100644 index 0000000..b14ae13 --- /dev/null +++ b/index.html @@ -0,0 +1,1167 @@ + + + + +
+ + + + + + + + +This repository contains the data used to demonstrate the utility of
+visiumStitched
.
+Three Visium
+capture areas were collected from the lateral septum of the postmortem
+human brain from one donor. We use Fiji and
+visiumStitched
to stitch the gene-expression and imaging
+data into one sample, containing the entire lateral septum, for
+downstream analysis.
If you tweet about this website, the data or the R package please use
+the #visiumStitched
hashtag. You can find previous tweets
+that way as shown
+here.
Thank you for your interest in our work!
+TODO: add figure 1 and caption
+/dcs05/lieber/lcolladotor/visiumStitched_LIBD1070/LS_visiumStitched
.The code in this repository follows the organization from https://github.com/LieberInstitute/template_project +following the guidelines from organizing-your-work..
+Check out this
+guide to using visiumStitched
, which enabled the
+integration of all three capture areas for this project.
TODO: embed YT video demonstrating how to use Fiji
+