Sometimes it helps to commit the .ipynb, .py, and .html of every notebook in each commit. Creating the .py and .html files can be done simply and automatically every time a notebook is saved by editing the jupyter config file and adding a post-save hook.
The default jupyter config file is found at:
~/.jupyter/jupyter_notebook_config.py
If you don’t have this file, run:
jupyter notebook --generate-config
to create this file, and add the following text:
import io
import os
from notebook.utils import to_api_path
_script_exporter = None
_html_exporter = None
def script_post_save(model, os_path, contents_manager, **kwargs):
"""convert notebooks to Python script after save with nbconvert
replaces `ipython notebook --script`
"""
from nbconvert.exporters.script import ScriptExporter
if model['type'] != 'notebook':
return
global _script_exporter
if _script_exporter is None:
_script_exporter = ScriptExporter(parent=contents_manager)
log = contents_manager.log
base, ext = os.path.splitext(os_path)
py_fname = base + '.py'
script, resources = _script_exporter.from_filename(os_path)
script_fname = base + resources.get('output_extension', '.txt')
log.info("Saving script /%s", to_api_path(script_fname, contents_manager.root_dir))
with io.open(script_fname, 'w', encoding='utf-8') as f:
f.write(script)
"""
Also convert notebooks to HTML after save with nbconvert
"""
from nbconvert.exporters.html import HTMLExporter
if model['type'] != 'notebook':
return
global _html_exporter
if _html_exporter is None:
_html_exporter = HTMLExporter(parent=contents_manager)
log = contents_manager.log
base, ext = os.path.splitext(os_path)
html, resources = _html_exporter.from_filename(os_path)
html_fname = base + resources.get('output_extension', '.html')
log.info("Saving HTML /%s", to_api_path(html_fname, contents_manager.root_dir))
with io.open(html_fname, 'w', encoding='utf-8') as f:
f.write(html)
c.FileContentsManager.post_save_hook = script_post_save
Adapted from http://jupyter-notebook.readthedocs.io/en/latest/extending/savehooks.html#examples and http://www.kdnuggets.com/2016/10/jupyter-notebook-best-practices-data-science.html with reference to https://github.com/jupyter/nbconvert and http://nbconvert.readthedocs.io/en/latest/api/exporters.html